These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
271 related articles for article (PubMed ID: 31323043)
1. Reorganization of 3D genome structure may contribute to gene regulatory evolution in primates. Eres IE; Luo K; Hsiao CJ; Blake LE; Gilad Y PLoS Genet; 2019 Jul; 15(7):e1008278. PubMed ID: 31323043 [TBL] [Abstract][Full Text] [Related]
2. 3D genome evolution and reorganization in the Drosophila melanogaster species group. Torosin NS; Anand A; Golla TR; Cao W; Ellison CE PLoS Genet; 2020 Dec; 16(12):e1009229. PubMed ID: 33284803 [TBL] [Abstract][Full Text] [Related]
3. The role of 3D chromatin domains in gene regulation: a multi-facetted view on genome organization. Ibrahim DM; Mundlos S Curr Opin Genet Dev; 2020 Apr; 61():1-8. PubMed ID: 32199341 [TBL] [Abstract][Full Text] [Related]
5. Contribution of transposable elements and distal enhancers to evolution of human-specific features of interphase chromatin architecture in embryonic stem cells. Glinsky GV Chromosome Res; 2018 Mar; 26(1-2):61-84. PubMed ID: 29335803 [TBL] [Abstract][Full Text] [Related]
6. Understanding 3D Genome Organization and Its Effect on Transcriptional Gene Regulation Under Environmental Stress in Plant: A Chromatin Perspective. Kumar S; Kaur S; Seem K; Kumar S; Mohapatra T Front Cell Dev Biol; 2021; 9():774719. PubMed ID: 34957106 [TBL] [Abstract][Full Text] [Related]
7. Co-regulation of paralog genes in the three-dimensional chromatin architecture. Ibn-Salem J; Muro EM; Andrade-Navarro MA Nucleic Acids Res; 2017 Jan; 45(1):81-91. PubMed ID: 27634932 [TBL] [Abstract][Full Text] [Related]
8. A TAD Skeptic: Is 3D Genome Topology Conserved? Eres IE; Gilad Y Trends Genet; 2021 Mar; 37(3):216-223. PubMed ID: 33203573 [TBL] [Abstract][Full Text] [Related]
9. Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains. Jiang S; Li H; Hong H; Du G; Huang X; Sun Y; Wang J; Tao H; Xu K; Li C; Chen Y; Chen H; Bo X Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32987404 [TBL] [Abstract][Full Text] [Related]
10. Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains. Ulianov SV; Khrameeva EE; Gavrilov AA; Flyamer IM; Kos P; Mikhaleva EA; Penin AA; Logacheva MD; Imakaev MV; Chertovich A; Gelfand MS; Shevelyov YY; Razin SV Genome Res; 2016 Jan; 26(1):70-84. PubMed ID: 26518482 [TBL] [Abstract][Full Text] [Related]
11. Genomic meta-analysis of the interplay between 3D chromatin organization and gene expression programs under basal and stress conditions. Nurick I; Shamir R; Elkon R Epigenetics Chromatin; 2018 Aug; 11(1):49. PubMed ID: 30157915 [TBL] [Abstract][Full Text] [Related]
12. SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering. Cresswell KG; Stansfield JC; Dozmorov MG BMC Bioinformatics; 2020 Jul; 21(1):319. PubMed ID: 32689928 [TBL] [Abstract][Full Text] [Related]
13. Machine and deep learning methods for predicting 3D genome organization. Wall BPG; Nguyen M; Harrell JC; Dozmorov MG ArXiv; 2024 Mar; ():. PubMed ID: 38495565 [TBL] [Abstract][Full Text] [Related]
14. Evolutionary dynamics of 3D genome architecture following polyploidization in cotton. Wang M; Wang P; Lin M; Ye Z; Li G; Tu L; Shen C; Li J; Yang Q; Zhang X Nat Plants; 2018 Feb; 4(2):90-97. PubMed ID: 29379149 [TBL] [Abstract][Full Text] [Related]
16. Analysis of the relationship between coexpression domains and chromatin 3D organization. Soler-Oliva ME; Guerrero-MartÃnez JA; Bachetti V; Reyes JC PLoS Comput Biol; 2017 Sep; 13(9):e1005708. PubMed ID: 28902867 [TBL] [Abstract][Full Text] [Related]
17. A map of cis-regulatory elements and 3D genome structures in zebrafish. Yang H; Luan Y; Liu T; Lee HJ; Fang L; Wang Y; Wang X; Zhang B; Jin Q; Ang KC; Xing X; Wang J; Xu J; Song F; Sriranga I; Khunsriraksakul C; Salameh T; Li D; Choudhary MNK; Topczewski J; Wang K; Gerhard GS; Hardison RC; Wang T; Cheng KC; Yue F Nature; 2020 Dec; 588(7837):337-343. PubMed ID: 33239788 [TBL] [Abstract][Full Text] [Related]
18. Epigenetic modifications are associated with inter-species gene expression variation in primates. Zhou X; Cain CE; Myrthil M; Lewellen N; Michelini K; Davenport ER; Stephens M; Pritchard JK; Gilad Y Genome Biol; 2014; 15(12):547. PubMed ID: 25468404 [TBL] [Abstract][Full Text] [Related]