These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

136 related articles for article (PubMed ID: 31373604)

  • 41. CDvist: a webserver for identification and visualization of conserved domains in protein sequences.
    Adebali O; Ortega DR; Zhulin IB
    Bioinformatics; 2015 May; 31(9):1475-7. PubMed ID: 25527097
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package.
    Kumar Y; Westram R; Kipfer P; Meier H; Ludwig W
    BMC Bioinformatics; 2006 May; 7():240. PubMed ID: 16672074
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Candidates for novel RNA topologies.
    Kim N; Shiffeldrim N; Gan HH; Schlick T
    J Mol Biol; 2004 Aug; 341(5):1129-44. PubMed ID: 15321711
    [TBL] [Abstract][Full Text] [Related]  

  • 44. StructureFold: genome-wide RNA secondary structure mapping and reconstruction in vivo.
    Tang Y; Bouvier E; Kwok CK; Ding Y; Nekrutenko A; Bevilacqua PC; Assmann SM
    Bioinformatics; 2015 Aug; 31(16):2668-75. PubMed ID: 25886980
    [TBL] [Abstract][Full Text] [Related]  

  • 45. RNApdbee 2.0: multifunctional tool for RNA structure annotation.
    Zok T; Antczak M; Zurkowski M; Popenda M; Blazewicz J; Adamiak RW; Szachniuk M
    Nucleic Acids Res; 2018 Jul; 46(W1):W30-W35. PubMed ID: 29718468
    [TBL] [Abstract][Full Text] [Related]  

  • 46. RNAG: a new Gibbs sampler for predicting RNA secondary structure for unaligned sequences.
    Wei D; Alpert LV; Lawrence CE
    Bioinformatics; 2011 Sep; 27(18):2486-93. PubMed ID: 21788211
    [TBL] [Abstract][Full Text] [Related]  

  • 47. RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs.
    Antczak M; Zablocki M; Zok T; Rybarczyk A; Blazewicz J; Szachniuk M
    Bioinformatics; 2019 Jan; 35(1):152-155. PubMed ID: 29985979
    [TBL] [Abstract][Full Text] [Related]  

  • 48. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Xu X; Ji Y; Stormo GD
    Bioinformatics; 2007 Aug; 23(15):1883-91. PubMed ID: 17537756
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Vernal: a tool for mining fuzzy network motifs in RNA.
    Oliver C; Mallet V; Philippopoulos P; Hamilton WL; Waldispühl J
    Bioinformatics; 2022 Jan; 38(4):970-976. PubMed ID: 34791045
    [TBL] [Abstract][Full Text] [Related]  

  • 50. GrAfSS: a webserver for substructure similarity searching and comparisons in the structures of proteins and RNA.
    Ghani NSA; Emrizal R; Moffit SM; Hamdani HY; Ramlan EI; Firdaus-Raih M
    Nucleic Acids Res; 2022 Jul; 50(W1):W375-W383. PubMed ID: 35639505
    [TBL] [Abstract][Full Text] [Related]  

  • 51. RNAsoft: A suite of RNA secondary structure prediction and design software tools.
    Andronescu M; Aguirre-Hernández R; Condon A; Hoos HH
    Nucleic Acids Res; 2003 Jul; 31(13):3416-22. PubMed ID: 12824338
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Using sequence signatures and kink-turn motifs in knowledge-based statistical potentials for RNA structure prediction.
    Bayrak CS; Kim N; Schlick T
    Nucleic Acids Res; 2017 May; 45(9):5414-5422. PubMed ID: 28158755
    [TBL] [Abstract][Full Text] [Related]  

  • 53. AMPA: an automated web server for prediction of protein antimicrobial regions.
    Torrent M; Di Tommaso P; Pulido D; Nogués MV; Notredame C; Boix E; Andreu D
    Bioinformatics; 2012 Jan; 28(1):130-1. PubMed ID: 22053077
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Tools for the automatic identification and classification of RNA base pairs.
    Yang H; Jossinet F; Leontis N; Chen L; Westbrook J; Berman H; Westhof E
    Nucleic Acids Res; 2003 Jul; 31(13):3450-60. PubMed ID: 12824344
    [TBL] [Abstract][Full Text] [Related]  

  • 55. RNA CoSSMos 2.0: an improved searchable database of secondary structure motifs in RNA three-dimensional structures.
    Richardson KE; Kirkpatrick CC; Znosko BM
    Database (Oxford); 2020 Jan; 2020():. PubMed ID: 31950189
    [TBL] [Abstract][Full Text] [Related]  

  • 56. LinkExplorer: predicting, explaining and exploring links in large biomedical knowledge graphs.
    Ott S; Barbosa-Silva A; Samwald M
    Bioinformatics; 2022 Apr; 38(8):2371-2373. PubMed ID: 35139158
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Mfold web server for nucleic acid folding and hybridization prediction.
    Zuker M
    Nucleic Acids Res; 2003 Jul; 31(13):3406-15. PubMed ID: 12824337
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Sequence-structure relations of biopolymers.
    Barrett C; Huang FW; Reidys CM
    Bioinformatics; 2017 Feb; 33(3):382-389. PubMed ID: 28171628
    [TBL] [Abstract][Full Text] [Related]  

  • 59. OxDNA.org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures.
    Poppleton E; Romero R; Mallya A; Rovigatti L; Šulc P
    Nucleic Acids Res; 2021 Jul; 49(W1):W491-W498. PubMed ID: 34009383
    [TBL] [Abstract][Full Text] [Related]  

  • 60. incaRNAfbinv: a web server for the fragment-based design of RNA sequences.
    Drory Retwitzer M; Reinharz V; Ponty Y; Waldispühl J; Barash D
    Nucleic Acids Res; 2016 Jul; 44(W1):W308-14. PubMed ID: 27185893
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.