BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

354 related articles for article (PubMed ID: 31373614)

  • 1. PyRanges: efficient comparison of genomic intervals in Python.
    Stovner EB; Sætrom P
    Bioinformatics; 2020 Feb; 36(3):918-919. PubMed ID: 31373614
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DNA Features Viewer: a sequence annotation formatting and plotting library for Python.
    Zulkower V; Rosser S
    Bioinformatics; 2020 Aug; 36(15):4350-4352. PubMed ID: 32637988
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Gos: a declarative library for interactive genomics visualization in Python.
    Manz T; L'Yi S; Gehlenborg N
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36688709
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Pybedtools: a flexible Python library for manipulating genomic datasets and annotations.
    Dale RK; Pedersen BS; Quinlan AR
    Bioinformatics; 2011 Dec; 27(24):3423-4. PubMed ID: 21949271
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pygenomics: manipulating genomic intervals and data files in Python.
    Tamazian G; Cherkasov N; Kanapin A; Samsonova A
    Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37228014
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pygenprop: a Python library for programmatic exploration and comparison of organism genome properties.
    Bergstrand LH; Neufeld JD; Doxey AC
    Bioinformatics; 2019 Dec; 35(23):5063-5065. PubMed ID: 31240307
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Simulating Illumina metagenomic data with InSilicoSeq.
    Gourlé H; Karlsson-Lindsjö O; Hayer J; Bongcam-Rudloff E
    Bioinformatics; 2019 Feb; 35(3):521-522. PubMed ID: 30016412
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BioStructMap: a Python tool for integration of protein structure and sequence-based features.
    Guy AJ; Irani V; Richards JS; Ramsland PA
    Bioinformatics; 2018 Nov; 34(22):3942-3944. PubMed ID: 29931276
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Explore, edit and leverage genomic annotations using Python GTF toolkit.
    Lopez F; Charbonnier G; Kermezli Y; Belhocine M; Ferré Q; Zweig N; Aribi M; Gonzalez A; Spicuglia S; Puthier D
    Bioinformatics; 2019 Sep; 35(18):3487-3488. PubMed ID: 30768152
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Efficient population-scale variant analysis and prioritization with VAPr.
    Birmingham A; Mark AM; Mazzaferro C; Xu G; Fisch KM
    Bioinformatics; 2018 Aug; 34(16):2843-2845. PubMed ID: 29659724
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Goldilocks: a tool for identifying genomic regions that are 'just right'.
    Nicholls SM; Clare A; Randall JC
    Bioinformatics; 2016 Jul; 32(13):2047-9. PubMed ID: 27153673
    [TBL] [Abstract][Full Text] [Related]  

  • 12. glypy: An Open Source Glycoinformatics Library.
    Klein J; Zaia J
    J Proteome Res; 2019 Sep; 18(9):3532-3537. PubMed ID: 31310539
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Analysing high-throughput sequencing data in Python with HTSeq 2.0.
    Putri GH; Anders S; Pyl PT; Pimanda JE; Zanini F
    Bioinformatics; 2022 May; 38(10):2943-2945. PubMed ID: 35561197
    [TBL] [Abstract][Full Text] [Related]  

  • 14. hts-nim: scripting high-performance genomic analyses.
    Pedersen BS; Quinlan AR
    Bioinformatics; 2018 Oct; 34(19):3387-3389. PubMed ID: 29718142
    [TBL] [Abstract][Full Text] [Related]  

  • 15. synergy: a Python library for calculating, analyzing and visualizing drug combination synergy.
    Wooten DJ; Albert R
    Bioinformatics; 2021 Jun; 37(10):1473-1474. PubMed ID: 32960970
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ssbio: a Python framework for structural systems biology.
    Mih N; Brunk E; Chen K; Catoiu E; Sastry A; Kavvas E; Monk JM; Zhang Z; Palsson BO
    Bioinformatics; 2018 Jun; 34(12):2155-2157. PubMed ID: 29444205
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Bioframe: operations on genomic intervals in Pandas dataframes.
    ; Abdennur N; Fudenberg G; Flyamer IM; Galitsyna AA; Goloborodko A; Imakaev M; Venev S
    Bioinformatics; 2024 Feb; 40(2):. PubMed ID: 38402507
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Rust-Bio: a fast and safe bioinformatics library.
    Köster J
    Bioinformatics; 2016 Feb; 32(3):444-6. PubMed ID: 26446134
    [TBL] [Abstract][Full Text] [Related]  

  • 19. pyBedGraph: a python package for fast operations on 1D genomic signal tracks.
    Zhang HB; Kim M; Chuang JH; Ruan Y
    Bioinformatics; 2020 May; 36(10):3234-3235. PubMed ID: 32044918
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PyLiger: scalable single-cell multi-omic data integration in Python.
    Lu L; Welch JD
    Bioinformatics; 2022 May; 38(10):2946-2948. PubMed ID: 35561174
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.