209 related articles for article (PubMed ID: 31384063)
1. Opposing chromatin remodelers control transcription initiation frequency and start site selection.
Kubik S; Bruzzone MJ; Challal D; Dreos R; Mattarocci S; Bucher P; Libri D; Shore D
Nat Struct Mol Biol; 2019 Aug; 26(8):744-754. PubMed ID: 31384063
[TBL] [Abstract][Full Text] [Related]
2. Sequence-Directed Action of RSC Remodeler and General Regulatory Factors Modulates +1 Nucleosome Position to Facilitate Transcription.
Kubik S; O'Duibhir E; de Jonge WJ; Mattarocci S; Albert B; Falcone JL; Bruzzone MJ; Holstege FCP; Shore D
Mol Cell; 2018 Jul; 71(1):89-102.e5. PubMed ID: 29979971
[TBL] [Abstract][Full Text] [Related]
3. A compendium of nucleosome and transcript profiles reveals determinants of chromatin architecture and transcription.
van Bakel H; Tsui K; Gebbia M; Mnaimneh S; Hughes TR; Nislow C
PLoS Genet; 2013 May; 9(5):e1003479. PubMed ID: 23658529
[TBL] [Abstract][Full Text] [Related]
4. Chd1p recognizes H3K36Ac to maintain nucleosome positioning near the transcription start site.
Kim H; Jo H; Seo HD; Park HS; Lee D
Biochem Biophys Res Commun; 2018 Sep; 503(3):1200-1206. PubMed ID: 30005873
[TBL] [Abstract][Full Text] [Related]
5. Sequence-targeted nucleosome sliding in vivo by a hybrid Chd1 chromatin remodeler.
McKnight JN; Tsukiyama T; Bowman GD
Genome Res; 2016 May; 26(5):693-704. PubMed ID: 26993344
[TBL] [Abstract][Full Text] [Related]
6. Establishing nucleosome architecture and stability at promoters: Roles of pioneer transcription factors and the RSC chromatin remodeler.
Kubik S; Bruzzone MJ; Shore D
Bioessays; 2017 May; 39(5):. PubMed ID: 28345796
[TBL] [Abstract][Full Text] [Related]
7. RSC-Associated Subnucleosomes Define MNase-Sensitive Promoters in Yeast.
Brahma S; Henikoff S
Mol Cell; 2019 Jan; 73(2):238-249.e3. PubMed ID: 30554944
[TBL] [Abstract][Full Text] [Related]
8. Nucleosome positioning in yeasts: methods, maps, and mechanisms.
Lieleg C; Krietenstein N; Walker M; Korber P
Chromosoma; 2015 Jun; 124(2):131-51. PubMed ID: 25529773
[TBL] [Abstract][Full Text] [Related]
9. General Regulatory Factors Control the Fidelity of Transcription by Restricting Non-coding and Ectopic Initiation.
Challal D; Barucco M; Kubik S; Feuerbach F; Candelli T; Geoffroy H; Benaksas C; Shore D; Libri D
Mol Cell; 2018 Dec; 72(6):955-969.e7. PubMed ID: 30576657
[TBL] [Abstract][Full Text] [Related]
10. A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization.
Gkikopoulos T; Schofield P; Singh V; Pinskaya M; Mellor J; Smolle M; Workman JL; Barton GJ; Owen-Hughes T
Science; 2011 Sep; 333(6050):1758-60. PubMed ID: 21940898
[TBL] [Abstract][Full Text] [Related]
11. A genomic code for nucleosome positioning.
Segal E; Fondufe-Mittendorf Y; Chen L; Thåström A; Field Y; Moore IK; Wang JP; Widom J
Nature; 2006 Aug; 442(7104):772-8. PubMed ID: 16862119
[TBL] [Abstract][Full Text] [Related]
12. A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern.
Hughes AL; Jin Y; Rando OJ; Struhl K
Mol Cell; 2012 Oct; 48(1):5-15. PubMed ID: 22885008
[TBL] [Abstract][Full Text] [Related]
13. Nucleosome positioning, nucleosome spacing and the nucleosome code.
Clark DJ
J Biomol Struct Dyn; 2010 Jun; 27(6):781-93. PubMed ID: 20232933
[TBL] [Abstract][Full Text] [Related]
14. Nucleosomes positioning around transcriptional start site of tumor suppressor (Rbl2/p130) gene in breast cancer.
Farman FU; Iqbal M; Azam M; Saeed M
Mol Biol Rep; 2018 Apr; 45(2):185-194. PubMed ID: 29417345
[TBL] [Abstract][Full Text] [Related]
15. The chromatin remodelers RSC and ISW1 display functional and chromatin-based promoter antagonism.
Parnell TJ; Schlichter A; Wilson BG; Cairns BR
Elife; 2015 Mar; 4():e06073. PubMed ID: 25821983
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide nucleosome specificity and directionality of chromatin remodelers.
Yen K; Vinayachandran V; Batta K; Koerber RT; Pugh BF
Cell; 2012 Jun; 149(7):1461-73. PubMed ID: 22726434
[TBL] [Abstract][Full Text] [Related]
17. Genome-wide mapping of nucleosome positions in Schizosaccharomyces pombe.
Lantermann A; Strålfors A; Fagerström-Billai F; Korber P; Ekwall K
Methods; 2009 Jul; 48(3):218-25. PubMed ID: 19233281
[TBL] [Abstract][Full Text] [Related]
18. Genome information processing by the INO80 chromatin remodeler positions nucleosomes.
Oberbeckmann E; Krietenstein N; Niebauer V; Wang Y; Schall K; Moldt M; Straub T; Rohs R; Hopfner KP; Korber P; Eustermann S
Nat Commun; 2021 May; 12(1):3231. PubMed ID: 34050142
[TBL] [Abstract][Full Text] [Related]
19. The histone variant H2A.Z in yeast is almost exclusively incorporated into the +1 nucleosome in the direction of transcription.
Bagchi DN; Battenhouse AM; Park D; Iyer VR
Nucleic Acids Res; 2020 Jan; 48(1):157-170. PubMed ID: 31722407
[TBL] [Abstract][Full Text] [Related]
20. Diversity of eukaryotic DNA replication origins revealed by genome-wide analysis of chromatin structure.
Berbenetz NM; Nislow C; Brown GW
PLoS Genet; 2010 Sep; 6(9):e1001092. PubMed ID: 20824081
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
