316 related articles for article (PubMed ID: 31410449)
1. ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering.
Morton K; Wang P; Bizon C; Cox S; Balhoff J; Kebede Y; Fecho K; Tropsha A
Bioinformatics; 2019 Dec; 35(24):5382-5384. PubMed ID: 31410449
[TBL] [Abstract][Full Text] [Related]
2. ROBOKOP KG and KGB: Integrated Knowledge Graphs from Federated Sources.
Bizon C; Cox S; Balhoff J; Kebede Y; Wang P; Morton K; Fecho K; Tropsha A
J Chem Inf Model; 2019 Dec; 59(12):4968-4973. PubMed ID: 31769676
[TBL] [Abstract][Full Text] [Related]
3. A Biomedical Knowledge Graph System to Propose Mechanistic Hypotheses for Real-World Environmental Health Observations: Cohort Study and Informatics Application.
Fecho K; Bizon C; Miller F; Schurman S; Schmitt C; Xue W; Morton K; Wang P; Tropsha A
JMIR Med Inform; 2021 Jul; 9(7):e26714. PubMed ID: 34283031
[TBL] [Abstract][Full Text] [Related]
4. COVID-KOP: integrating emerging COVID-19 data with the ROBOKOP database.
Korn D; Bobrowski T; Li M; Kebede Y; Wang P; Owen P; Vaidya G; Muratov E; Chirkova R; Bizon C; Tropsha A
Bioinformatics; 2021 May; 37(4):586-587. PubMed ID: 33175089
[TBL] [Abstract][Full Text] [Related]
5. Visualization Environment for Federated Knowledge Graphs: Development of an Interactive Biomedical Query Language and Web Application Interface.
Cox S; Ahalt SC; Balhoff J; Bizon C; Fecho K; Kebede Y; Morton K; Tropsha A; Wang P; Xu H
JMIR Med Inform; 2020 Nov; 8(11):e17964. PubMed ID: 33226347
[TBL] [Abstract][Full Text] [Related]
6. COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database.
Korn D; Bobrowski T; Li M; Kebede Y; Wang P; Owen P; Vaidya G; Muratov E; Chirkova R; Bizon C; Tropsha A
ChemRxiv; 2020 Jun; ():. PubMed ID: 32601612
[TBL] [Abstract][Full Text] [Related]
7. ARAX: a graph-based modular reasoning tool for translational biomedicine.
Glen AK; Ma C; Mendoza L; Womack F; Wood EC; Sinha M; Acevedo L; Kvarfordt LG; Peene RC; Liu S; Hoffman AS; Roach JC; Deutsch EW; Ramsey SA; Koslicki D
Bioinformatics; 2023 Mar; 39(3):. PubMed ID: 36752514
[TBL] [Abstract][Full Text] [Related]
8. Expediting knowledge acquisition by a web framework for Knowledge Graph Exploration and Visualization (KGEV): case studies on COVID-19 and Human Phenotype Ontology.
Peng J; Xu D; Lee R; Xu S; Zhou Y; Wang K
BMC Med Inform Decis Mak; 2022 Jun; 22(Suppl 2):147. PubMed ID: 35655307
[TBL] [Abstract][Full Text] [Related]
9. cMapper: gene-centric connectivity mapper for EBI-RDF platform.
Shoaib M; Ansari AA; Ahn SM
Bioinformatics; 2017 Jan; 33(2):266-271. PubMed ID: 27667790
[TBL] [Abstract][Full Text] [Related]
10. BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs.
Callaghan J; Xu CH; Xin J; Cano MA; Riutta A; Zhou E; Juneja R; Yao Y; Narayan M; Hanspers K; Agrawal A; Pico AR; Wu C; Su AI
Bioinformatics; 2023 Sep; 39(9):. PubMed ID: 37707514
[TBL] [Abstract][Full Text] [Related]
11. The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information.
Morris JH; Soman K; Akbas RE; Zhou X; Smith B; Meng EC; Huang CC; Cerono G; Schenk G; Rizk-Jackson A; Harroud A; Sanders L; Costes SV; Bharat K; Chakraborty A; Pico AR; Mardirossian T; Keiser M; Tang A; Hardi J; Shi Y; Musen M; Israni S; Huang S; Rose PW; Nelson CA; Baranzini SE
Bioinformatics; 2023 Feb; 39(2):. PubMed ID: 36759942
[TBL] [Abstract][Full Text] [Related]
12. BioKEEN: a library for learning and evaluating biological knowledge graph embeddings.
Ali M; Hoyt CT; Domingo-Fernández D; Lehmann J; Jabeen H
Bioinformatics; 2019 Sep; 35(18):3538-3540. PubMed ID: 30768158
[TBL] [Abstract][Full Text] [Related]
13. StonPy: a tool to parse and query collections of SBGN maps in a graph database.
Rougny A; Balaur I; Luna A; Mazein A
Bioinformatics; 2023 Mar; 39(3):. PubMed ID: 36897014
[TBL] [Abstract][Full Text] [Related]
14. STonKGs: a sophisticated transformer trained on biomedical text and knowledge graphs.
Balabin H; Hoyt CT; Birkenbihl C; Gyori BM; Bachman J; Kodamullil AT; Plöger PG; Hofmann-Apitius M; Domingo-Fernández D
Bioinformatics; 2022 Mar; 38(6):1648-1656. PubMed ID: 34986221
[TBL] [Abstract][Full Text] [Related]
15. ExEmPLAR (Extracting, Exploring, and Embedding Pathways Leading to Actionable Research): a user-friendly interface for knowledge graph mining.
Beasley JT; Korn DR; Tucker NN; Alves ETM; Muratov EN; Bizon C; Tropsha A
Bioinformatics; 2024 Jan; 40(1):. PubMed ID: 38175789
[TBL] [Abstract][Full Text] [Related]
16. Bio-SODA UX: enabling natural language question answering over knowledge graphs with user disambiguation.
Sima AC; Mendes de Farias T; Anisimova M; Dessimoz C; Robinson-Rechavi M; Zbinden E; Stockinger K
Distrib Parallel Databases; 2022; 40(2-3):409-440. PubMed ID: 36097541
[TBL] [Abstract][Full Text] [Related]
17. QAnalysis: a question-answer driven analytic tool on knowledge graphs for leveraging electronic medical records for clinical research.
Ruan T; Huang Y; Liu X; Xia Y; Gao J
BMC Med Inform Decis Mak; 2019 Apr; 19(1):82. PubMed ID: 30935389
[TBL] [Abstract][Full Text] [Related]
18. Graph NLU enabled question answering system.
Varma S; Shivam S; Biswas S; Saha P; Jalan K
Heliyon; 2021 Sep; 7(9):e08035. PubMed ID: 34622048
[TBL] [Abstract][Full Text] [Related]
19. Algorithms for effective querying of compound graph-based pathway databases.
Dogrusoz U; Cetintas A; Demir E; Babur O
BMC Bioinformatics; 2009 Nov; 10():376. PubMed ID: 19917102
[TBL] [Abstract][Full Text] [Related]
20. GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins.
Durand P; Labarre L; Meil A; Divo JL; Vandenbrouck Y; Viari A; Wojcik J
BMC Bioinformatics; 2006 Jan; 7():21. PubMed ID: 16417636
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]