BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

166 related articles for article (PubMed ID: 31429292)

  • 1. hSWATH: Unlocking SWATH's Full Potential for an Untargeted Histone Perspective.
    De Clerck L; Willems S; Noberini R; Restellini C; Van Puyvelde B; Daled S; Bonaldi T; Deforce D; Dhaenens M
    J Proteome Res; 2019 Nov; 18(11):3840-3849. PubMed ID: 31429292
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Quantification of SAHA-Dependent Changes in Histone Modifications Using Data-Independent Acquisition Mass Spectrometry.
    Krautkramer KA; Reiter L; Denu JM; Dowell JA
    J Proteome Res; 2015 Aug; 14(8):3252-62. PubMed ID: 26120868
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications.
    Sidoli S; Lin S; Xiong L; Bhanu NV; Karch KR; Johansen E; Hunter C; Mollah S; Garcia BA
    Mol Cell Proteomics; 2015 Sep; 14(9):2420-8. PubMed ID: 25636311
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comprehensive histone epigenetics: A mass spectrometry based screening assay to measure epigenetic toxicity.
    Verhelst S; De Clerck L; Willems S; Van Puyvelde B; Daled S; Deforce D; Dhaenens M
    MethodsX; 2020; 7():101055. PubMed ID: 32995308
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Optimization of Acquisition and Data-Processing Parameters for Improved Proteomic Quantification by Sequential Window Acquisition of All Theoretical Fragment Ion Mass Spectrometry.
    Li S; Cao Q; Xiao W; Guo Y; Yang Y; Duan X; Shui W
    J Proteome Res; 2017 Feb; 16(2):738-747. PubMed ID: 27995803
    [TBL] [Abstract][Full Text] [Related]  

  • 6. [Extraction and isolation of histones from paraffin-embedded tissues and quantitative analysis of post-translational modifications].
    Tian S; Liu R; Qian X; Guo X; Zhang K
    Se Pu; 2021 Oct; 39(10):1094-1101. PubMed ID: 34505431
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Pathology Tissue-quantitative Mass Spectrometry Analysis to Profile Histone Post-translational Modification Patterns in Patient Samples.
    Noberini R; Uggetti A; Pruneri G; Minucci S; Bonaldi T
    Mol Cell Proteomics; 2016 Mar; 15(3):866-77. PubMed ID: 26463340
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Applying 'Sequential Windowed Acquisition of All Theoretical Fragment Ion Mass Spectra' (SWATH) for systematic toxicological analysis with liquid chromatography-high-resolution tandem mass spectrometry.
    Arnhard K; Gottschall A; Pitterl F; Oberacher H
    Anal Bioanal Chem; 2015 Jan; 407(2):405-14. PubMed ID: 25366975
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Mass spectrometry and DigiWest technology emphasize protein acetylation profile from Quisinostat-treated HuT78 CTCL cell line.
    Méhul B; Perrin A; Grisendi K; Galindo AN; Dayon L; Ménigot C; Rival Y; Voegel JJ
    J Proteomics; 2018 Sep; 187():126-143. PubMed ID: 30012418
    [TBL] [Abstract][Full Text] [Related]  

  • 10. High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications.
    Karch KR; Zee BM; Garcia BA
    J Proteome Res; 2014 Dec; 13(12):6152-9. PubMed ID: 25325711
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SWATH Mass Spectrometry Applied to Cerebrospinal Fluid Differential Proteomics: Establishment of a Sample-Specific Method.
    Anjo SI; Santa C; Manadas B
    Methods Mol Biol; 2019; 2044():169-189. PubMed ID: 31432413
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry.
    Baliban RC; DiMaggio PA; Plazas-Mayorca MD; Young NL; Garcia BA; Floudas CA
    Mol Cell Proteomics; 2010 May; 9(5):764-79. PubMed ID: 20103568
    [TBL] [Abstract][Full Text] [Related]  

  • 13. High-Resolution Lysine Acetylome Profiling by Offline Fractionation and Immunoprecipitation.
    Giese J; Lassowskat I; Finkemeier I
    Methods Mol Biol; 2020; 2139():241-256. PubMed ID: 32462591
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Exploring the Potential of Data-Independent Acquisition Proteomics Using Untargeted All-Ion Quantitation: Application to Tumor Subtype Diagnosis.
    Yan Z; Yan R
    Anal Chem; 2018 Apr; 90(7):4380-4388. PubMed ID: 29522333
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Low Resolution Data-Independent Acquisition in an LTQ-Orbitrap Allows for Simplified and Fully Untargeted Analysis of Histone Modifications.
    Sidoli S; Simithy J; Karch KR; Kulej K; Garcia BA
    Anal Chem; 2015 Nov; 87(22):11448-54. PubMed ID: 26505526
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Quantitative analysis of histone deacetylase-1 selective histone modifications by differential mass spectrometry.
    Lee AY; Paweletz CP; Pollock RM; Settlage RE; Cruz JC; Secrist JP; Miller TA; Stanton MG; Kral AM; Ozerova ND; Meng F; Yates NA; Richon V; Hendrickson RC
    J Proteome Res; 2008 Dec; 7(12):5177-86. PubMed ID: 19367703
    [TBL] [Abstract][Full Text] [Related]  

  • 17. High-Resolution Parallel Reaction Monitoring with Electron Transfer Dissociation for Middle-Down Proteomics: An Application to Study the Quantitative Changes Induced by Histone Modifying Enzyme Inhibitors and Activators.
    Sweredoski MJ; Moradian A; Hess S
    Methods Mol Biol; 2017; 1647():61-69. PubMed ID: 28808995
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Integrated Analysis of Acetyl-CoA and Histone Modification via Mass Spectrometry to Investigate Metabolically Driven Acetylation.
    Sidoli S; Trefely S; Garcia BA; Carrer A
    Methods Mol Biol; 2019; 1928():125-147. PubMed ID: 30725455
    [TBL] [Abstract][Full Text] [Related]  

  • 19. EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data.
    Yuan ZF; Sidoli S; Marchione DM; Simithy J; Janssen KA; Szurgot MR; Garcia BA
    J Proteome Res; 2018 Jul; 17(7):2533-2541. PubMed ID: 29790754
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Targeted detection and quantitation of histone modifications from 1,000 cells.
    Abshiru NA; Sikora JW; Camarillo JM; Morris JA; Compton PD; Lee T; Neelamraju Y; Haddox S; Sheridan C; Carroll M; Cripe LD; Tallman MS; Paietta EM; Melnick AM; Thomas PM; Garrett-Bakelman FE; Kelleher NL
    PLoS One; 2020; 15(10):e0240829. PubMed ID: 33104722
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.