These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 31433830)

  • 1. Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin-producing Escherichia coli.
    Greig DR; Jenkins C; Gharbia S; Dallman TJ
    Gigascience; 2019 Aug; 8(8):. PubMed ID: 31433830
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
    Bogaerts B; Van den Bossche A; Verhaegen B; Delbrassinne L; Mattheus W; Nouws S; Godfroid M; Hoffman S; Roosens NHC; De Keersmaecker SCJ; Vanneste K
    J Clin Microbiol; 2024 May; 62(5):e0157623. PubMed ID: 38441926
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Serogroup-level resolution of the "Super-7" Shiga toxin-producing Escherichia coli using nanopore single-molecule DNA sequencing.
    Peritz A; Paoli GC; Chen CY; Gehring AG
    Anal Bioanal Chem; 2018 Sep; 410(22):5439-5444. PubMed ID: 29374775
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evolutionary Context of Non-Sorbitol-Fermenting Shiga Toxin-Producing Escherichia coli O55:H7.
    Schutz K; Cowley LA; Shaaban S; Carroll A; McNamara E; Gally DL; Godbole G; Jenkins C; Dallman TJ
    Emerg Infect Dis; 2017 Dec; 23(12):1966-1973. PubMed ID: 29148397
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Analysis of a small outbreak of Shiga toxin-producing
    Greig DR; Jenkins C; Gharbia SE; Dallman TJ
    Microb Genom; 2021 Mar; 7(3):. PubMed ID: 33683192
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Re-analysis of an outbreak of Shiga toxin-producing Escherichia coli O157:H7 associated with raw drinking milk using Nanopore sequencing.
    Greig DR; Do Nascimento V; Gally DL; Gharbia SE; Dallman TJ; Jenkins C
    Sci Rep; 2024 Mar; 14(1):5821. PubMed ID: 38461188
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Phylogenetic structure of Shiga toxin-producing
    Dallman TJ; Greig DR; Gharbia SE; Jenkins C
    Microb Genom; 2021 Mar; 7(3):. PubMed ID: 33720818
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interrogation of single nucleotide polymorphisms in gnd provides a novel method for molecular serogrouping of clinically important Shiga toxin producing Escherichia coli (STEC) targeted by regulation in the United States, including the "big six" non-O157 STEC and STEC O157.
    Elder JR; Bugarel M; den Bakker HC; Loneragan GH; Nightingale KK
    J Microbiol Methods; 2016 Oct; 129():85-93. PubMed ID: 27432340
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Impact of whole genome sequencing on the investigation of food-borne outbreaks of Shiga toxin-producing
    Jenkins C; Dallman TJ; Grant KA
    Euro Surveill; 2019 Jan; 24(4):. PubMed ID: 30696532
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Molecular Prediction of the O157:H-Negative Phenotype Prevalent in Australian Shiga Toxin-Producing Escherichia coli Cases Improves Concordance of
    Pintara AP; Guglielmino CJD; Rathnayake IU; Huygens F; Jennison AV
    J Clin Microbiol; 2018 Apr; 56(4):. PubMed ID: 29367299
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genomic analysis of Shiga toxin-producing Escherichia coli from patients and asymptomatic food handlers in Japan.
    Baba H; Kanamori H; Kudo H; Kuroki Y; Higashi S; Oka K; Takahashi M; Yoshida M; Oshima K; Aoyagi T; Tokuda K; Kaku M
    PLoS One; 2019; 14(11):e0225340. PubMed ID: 31743366
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of Shiga Toxin-Producing Escherichia coli Outbreaks Using Whole Genome Sequencing.
    Bletz S; Mellmann A; Middendorf-Bauchart B
    Methods Mol Biol; 2021; 2291():87-97. PubMed ID: 33704749
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective.
    Rumore J; Tschetter L; Kearney A; Kandar R; McCormick R; Walker M; Peterson CL; Reimer A; Nadon C
    BMC Genomics; 2018 Dec; 19(1):870. PubMed ID: 30514209
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Improved Genomic Identification, Clustering, and Serotyping of Shiga Toxin-Producing
    Zhang X; Payne M; Kaur S; Lan R
    Front Cell Infect Microbiol; 2021; 11():772574. PubMed ID: 35083165
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Outbreak of Shiga toxin-producing
    Treacy J; Jenkins C; Paranthaman K; Jorgensen F; Mueller-Doblies D; Anjum M; Kaindama L; Hartman H; Kirchner M; Carson T; Kar-Purkayastha I
    Euro Surveill; 2019 Apr; 24(16):. PubMed ID: 31014418
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The utility and public health implications of PCR and whole genome sequencing for the detection and investigation of an outbreak of Shiga toxin-producing Escherichia coli serogroup O26:H11.
    Dallman TJ; Byrne L; Launders N; Glen K; Grant KA; Jenkins C
    Epidemiol Infect; 2015 Jun; 143(8):1672-80. PubMed ID: 25316375
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Characteristics of the Shiga-toxin-producing enteroaggregative Escherichia coli O104:H4 German outbreak strain and of STEC strains isolated in Spain.
    Mora A; Herrrera A; López C; Dahbi G; Mamani R; Pita JM; Alonso MP; Llovo J; Bernárdez MI; Blanco JE; Blanco M; Blanco J
    Int Microbiol; 2011 Sep; 14(3):121-41. PubMed ID: 22101411
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing
    Bogaerts B; Nouws S; Verhaegen B; Denayer S; Van Braekel J; Winand R; Fu Q; Crombé F; Piérard D; Marchal K; Roosens NHC; De Keersmaecker SCJ; Vanneste K
    Microb Genom; 2021 Mar; 7(3):. PubMed ID: 33656437
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Whole-genome sequencing for national surveillance of Shiga toxin-producing Escherichia coli O157.
    Dallman TJ; Byrne L; Ashton PM; Cowley LA; Perry NT; Adak G; Petrovska L; Ellis RJ; Elson R; Underwood A; Green J; Hanage WP; Jenkins C; Grant K; Wain J
    Clin Infect Dis; 2015 Aug; 61(3):305-12. PubMed ID: 25888672
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia.
    Ingle DJ; Gonçalves da Silva A; Valcanis M; Ballard SA; Seemann T; Jennison AV; Bastian I; Wise R; Kirk MD; Howden BP; Williamson DA
    Microb Genom; 2019 May; 5(5):. PubMed ID: 31107203
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.