177 related articles for article (PubMed ID: 31445016)
1. Fundamental asymmetry of insertions and deletions in genomes size evolution.
He Y; Tian S; Tian P
J Theor Biol; 2019 Dec; 482():109983. PubMed ID: 31445016
[TBL] [Abstract][Full Text] [Related]
2. General continuous-time Markov model of sequence evolution via insertions/deletions: are alignment probabilities factorable?
Ezawa K
BMC Bioinformatics; 2016 Aug; 17():304. PubMed ID: 27638547
[TBL] [Abstract][Full Text] [Related]
3. A phylogenetic analysis of indel dynamics in the cotton genus.
Grover CE; Yu Y; Wing RA; Paterson AH; Wendel JF
Mol Biol Evol; 2008 Jul; 25(7):1415-28. PubMed ID: 18400789
[TBL] [Abstract][Full Text] [Related]
4. Slow DNA loss in the gigantic genomes of salamanders.
Sun C; López Arriaza JR; Mueller RL
Genome Biol Evol; 2012; 4(12):1340-8. PubMed ID: 23175715
[TBL] [Abstract][Full Text] [Related]
5. Small insertions are more deleterious than small deletions in human genomes.
Huang S; Li J; Xu A; Huang G; You L
Hum Mutat; 2013 Dec; 34(12):1642-9. PubMed ID: 24000181
[TBL] [Abstract][Full Text] [Related]
6. The evolution of small insertions and deletions in the coding genes of Drosophila melanogaster.
Chong Z; Zhai W; Li C; Gao M; Gong Q; Ruan J; Li J; Jiang L; Lv X; Hungate E; Wu CI
Mol Biol Evol; 2013 Dec; 30(12):2699-708. PubMed ID: 24077769
[TBL] [Abstract][Full Text] [Related]
7. Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes.
Taylor MS; Ponting CP; Copley RR
Genome Res; 2004 Apr; 14(4):555-66. PubMed ID: 15059996
[TBL] [Abstract][Full Text] [Related]
8. Low levels of LTR retrotransposon deletion by ectopic recombination in the gigantic genomes of salamanders.
Frahry MB; Sun C; Chong RA; Mueller RL
J Mol Evol; 2015 Feb; 80(2):120-9. PubMed ID: 25608479
[TBL] [Abstract][Full Text] [Related]
9. The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes.
Montgomery SB; Goode DL; Kvikstad E; Albers CA; Zhang ZD; Mu XJ; Ananda G; Howie B; Karczewski KJ; Smith KS; Anaya V; Richardson R; Davis J; ; MacArthur DG; Sidow A; Duret L; Gerstein M; Makova KD; Marchini J; McVean G; Lunter G
Genome Res; 2013 May; 23(5):749-61. PubMed ID: 23478400
[TBL] [Abstract][Full Text] [Related]
10. Genome and gene alterations by insertions and deletions in the evolution of human and chimpanzee chromosome 22.
Volfovsky N; Oleksyk TK; Cruz KC; Truelove AL; Stephens RM; Smith MW
BMC Genomics; 2009 Jan; 10():51. PubMed ID: 19171065
[TBL] [Abstract][Full Text] [Related]
11. Sequence context affects the rate of short insertions and deletions in flies and primates.
Tanay A; Siggia ED
Genome Biol; 2008; 9(2):R37. PubMed ID: 18291026
[TBL] [Abstract][Full Text] [Related]
12. Patterns and rates of indel evolution in processed pseudogenes from humans and murids.
Ophir R; Graur D
Gene; 1997 Dec; 205(1-2):191-202. PubMed ID: 9461394
[TBL] [Abstract][Full Text] [Related]
13. Short indels are subject to insertion-biased gene conversion.
Leushkin EV; Bazykin GA
Evolution; 2013 Sep; 67(9):2604-13. PubMed ID: 24033170
[TBL] [Abstract][Full Text] [Related]
14. Using the Neandertal genome to study the evolution of small insertions and deletions in modern humans.
Chintalapati M; Dannemann M; Prüfer K
BMC Evol Biol; 2017 Aug; 17(1):179. PubMed ID: 28778150
[TBL] [Abstract][Full Text] [Related]
15. The evolutionary dynamics that retain long neutral genomic sequences in face of indel deletion bias: a model and its application to human introns.
Loewenthal G; Wygoda E; Nagar N; Glick L; Mayrose I; Pupko T
Open Biol; 2022 Dec; 12(12):220223. PubMed ID: 36514983
[TBL] [Abstract][Full Text] [Related]
16. Pervasive indels and their evolutionary dynamics after the fish-specific genome duplication.
Guo B; Zou M; Wagner A
Mol Biol Evol; 2012 Oct; 29(10):3005-22. PubMed ID: 22490820
[TBL] [Abstract][Full Text] [Related]
17. Patterns of nucleotide substitution, insertion and deletion in the human genome inferred from pseudogenes.
Zhang Z; Gerstein M
Nucleic Acids Res; 2003 Sep; 31(18):5338-48. PubMed ID: 12954770
[TBL] [Abstract][Full Text] [Related]
18. The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment.
Gu X; Li WH
J Mol Evol; 1995 Apr; 40(4):464-73. PubMed ID: 7769622
[TBL] [Abstract][Full Text] [Related]
19. Evolution of genomic sequence inhomogeneity at mid-range scales.
Prakash A; Shepard SS; He J; Hart B; Chen M; Amarachintha SP; Mileyeva-Biebesheimer O; Bechtel J; Fedorov A
BMC Genomics; 2009 Nov; 10():513. PubMed ID: 19891785
[TBL] [Abstract][Full Text] [Related]
20. The genome-wide landscape of small insertion and deletion mutations in Monopterus albus.
Chen F; Fengling Lai ; Luo M; Han YS; Cheng H; Zhou R
J Genet Genomics; 2019 Feb; 46(2):75-86. PubMed ID: 30867123
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
