130 related articles for article (PubMed ID: 31446519)
1. On Computing Structural and Behavioral Complexities of Threshold Boolean Networks : Application to Biological Networks.
Christen U; Ivanov S; Segretain R; Trilling L; Glade N
Acta Biotheor; 2020 Mar; 68(1):119-138. PubMed ID: 31446519
[TBL] [Abstract][Full Text] [Related]
2. A Combinatorial Exploration of Boolean Dynamics Generated by Isolated and Chorded Circuits.
Mossé B; Remy É
Acta Biotheor; 2020 Mar; 68(1):87-117. PubMed ID: 31407132
[TBL] [Abstract][Full Text] [Related]
3. Boolean dynamics of biological networks with multiple coupled feedback loops.
Kwon YK; Cho KH
Biophys J; 2007 Apr; 92(8):2975-81. PubMed ID: 17259267
[TBL] [Abstract][Full Text] [Related]
4. An efficient algorithm for computing attractors of synchronous and asynchronous Boolean networks.
Zheng D; Yang G; Li X; Wang Z; Liu F; He L
PLoS One; 2013; 8(4):e60593. PubMed ID: 23585840
[TBL] [Abstract][Full Text] [Related]
5. Emergent criticality from coevolution in random Boolean networks.
Liu M; Bassler KE
Phys Rev E Stat Nonlin Soft Matter Phys; 2006 Oct; 74(4 Pt 1):041910. PubMed ID: 17155099
[TBL] [Abstract][Full Text] [Related]
6. A SAT-based algorithm for finding attractors in synchronous Boolean networks.
Dubrova E; Teslenko M
IEEE/ACM Trans Comput Biol Bioinform; 2011; 8(5):1393-9. PubMed ID: 21778527
[TBL] [Abstract][Full Text] [Related]
7. Simulation study in Probabilistic Boolean Network models for genetic regulatory networks.
Zhang SQ; Ching WK; Ng MK; Akutsu T
Int J Data Min Bioinform; 2007; 1(3):217-40. PubMed ID: 18399072
[TBL] [Abstract][Full Text] [Related]
8. Reduction of Boolean network models.
Veliz-Cuba A
J Theor Biol; 2011 Nov; 289():167-72. PubMed ID: 21907211
[TBL] [Abstract][Full Text] [Related]
9. An efficient algorithm for computing fixed length attractors based on bounded model checking in synchronous Boolean networks with biochemical applications.
Li XY; Yang GW; Zheng DS; Guo WS; Hung WN
Genet Mol Res; 2015 Apr; 14(2):4238-44. PubMed ID: 25966195
[TBL] [Abstract][Full Text] [Related]
10. Inference of gene regulatory networks using boolean-network inference methods.
Hickman GJ; Hodgman TC
J Bioinform Comput Biol; 2009 Dec; 7(6):1013-29. PubMed ID: 20014476
[TBL] [Abstract][Full Text] [Related]
11. An efficient approach of attractor calculation for large-scale Boolean gene regulatory networks.
He Q; Xia Z; Lin B
J Theor Biol; 2016 Nov; 408():137-144. PubMed ID: 27524645
[TBL] [Abstract][Full Text] [Related]
12. On the underlying assumptions of threshold Boolean networks as a model for genetic regulatory network behavior.
Tran V; McCall MN; McMurray HR; Almudevar A
Front Genet; 2013; 4():263. PubMed ID: 24376454
[TBL] [Abstract][Full Text] [Related]
13. Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method.
Dorier J; Crespo I; Niknejad A; Liechti R; Ebeling M; Xenarios I
BMC Bioinformatics; 2016 Oct; 17(1):410. PubMed ID: 27716031
[TBL] [Abstract][Full Text] [Related]
14. Logic backbone of a transcription network.
Cosentino Lagomarsino M; Jona P; Bassetti B
Phys Rev Lett; 2005 Oct; 95(15):158701. PubMed ID: 16241770
[TBL] [Abstract][Full Text] [Related]
15. On the limit cycle structure of threshold boolean networks over complete graphs.
Voutsadakis G
Int J Neural Syst; 2004 Jun; 14(3):209-15. PubMed ID: 15243953
[TBL] [Abstract][Full Text] [Related]
16. Combining Boolean method with delay times for determining behaviors of biological networks.
Lyu S
Annu Int Conf IEEE Eng Med Biol Soc; 2009; 2009():4884-7. PubMed ID: 19963634
[TBL] [Abstract][Full Text] [Related]
17. Expansion of signal transduction networks.
Binder B; Ebenhöh O; Hashimoto K; Heinrich R
Syst Biol (Stevenage); 2006 Sep; 153(5):364-8. PubMed ID: 16986318
[TBL] [Abstract][Full Text] [Related]
18. Modeling mechanistic biological networks: an advanced Boolean approach.
Handorf T; Klipp E
Bioinformatics; 2012 Feb; 28(4):557-63. PubMed ID: 22199382
[TBL] [Abstract][Full Text] [Related]
19. Relative stability of network states in Boolean network models of gene regulation in development.
Zhou JX; Samal A; d'Hérouël AF; Price ND; Huang S
Biosystems; 2016; 142-143():15-24. PubMed ID: 26965665
[TBL] [Abstract][Full Text] [Related]
20. Controlling large Boolean networks with single-step perturbations.
Baudin A; Paul S; Su C; Pang J
Bioinformatics; 2019 Jul; 35(14):i558-i567. PubMed ID: 31510648
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
