391 related articles for article (PubMed ID: 3146682)
1. "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons.
Shields DC; Sharp PM; Higgins DG; Wright F
Mol Biol Evol; 1988 Nov; 5(6):704-16. PubMed ID: 3146682
[TBL] [Abstract][Full Text] [Related]
2. A test of translational selection at 'silent' sites in the human genome: base composition comparisons in alternatively spliced genes.
Iida K; Akashi H
Gene; 2000 Dec; 261(1):93-105. PubMed ID: 11164041
[TBL] [Abstract][Full Text] [Related]
3. Mutation and selection at silent and replacement sites in the evolution of animal mitochondrial DNA.
Rand DM; Kann LM
Genetica; 1998; 102-103(1-6):393-407. PubMed ID: 9720291
[TBL] [Abstract][Full Text] [Related]
4. DNA sequence evolution: the sounds of silence.
Sharp PM; Averof M; Lloyd AT; Matassi G; Peden JF
Philos Trans R Soc Lond B Biol Sci; 1995 Sep; 349(1329):241-7. PubMed ID: 8577834
[TBL] [Abstract][Full Text] [Related]
5. Mutation pressure, natural selection, and the evolution of base composition in Drosophila.
Akashi H; Kliman RM; Eyre-Walker A
Genetica; 1998; 102-103(1-6):49-60. PubMed ID: 9720271
[TBL] [Abstract][Full Text] [Related]
6. Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA.
Akashi H
Genetics; 1995 Feb; 139(2):1067-76. PubMed ID: 7713409
[TBL] [Abstract][Full Text] [Related]
7. The level of cytosine is usually much higher than the level of guanine in two-fold degenerated sites from third codon positions of genes from Simplex- and Varicelloviruses with G+C higher than 50%.
Khrustalev VV; Barkovsky EV
J Theor Biol; 2010 Sep; 266(1):88-98. PubMed ID: 20600145
[TBL] [Abstract][Full Text] [Related]
8. Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.
Akashi H
Genetics; 1994 Mar; 136(3):927-35. PubMed ID: 8005445
[TBL] [Abstract][Full Text] [Related]
9. Developmental stage related patterns of codon usage and genomic GC content: searching for evolutionary fingerprints with models of stem cell differentiation.
Ren L; Gao G; Zhao D; Ding M; Luo J; Deng H
Genome Biol; 2007; 8(3):R35. PubMed ID: 17349061
[TBL] [Abstract][Full Text] [Related]
10. Evidence for a trade-off between translational efficiency and splicing regulation in determining synonymous codon usage in Drosophila melanogaster.
Warnecke T; Hurst LD
Mol Biol Evol; 2007 Dec; 24(12):2755-62. PubMed ID: 17905999
[TBL] [Abstract][Full Text] [Related]
11. Hill-Robertson interference is a minor determinant of variations in codon bias across Drosophila melanogaster and Caenorhabditis elegans genomes.
Marais G; Piganeau G
Mol Biol Evol; 2002 Sep; 19(9):1399-406. PubMed ID: 12200468
[TBL] [Abstract][Full Text] [Related]
12. Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C and G-ending codons.
Fennoy SL; Bailey-Serres J
Nucleic Acids Res; 1993 Nov; 21(23):5294-300. PubMed ID: 8265340
[TBL] [Abstract][Full Text] [Related]
13. Selection on silent sites in the rodent H3 histone gene family.
DeBry RW; Marzluff WF
Genetics; 1994 Sep; 138(1):191-202. PubMed ID: 8001786
[TBL] [Abstract][Full Text] [Related]
14. The evolution of codon preferences in Drosophila: a maximum-likelihood approach to parameter estimation and hypothesis testing.
McVean GA; Vieira J
J Mol Evol; 1999 Jul; 49(1):63-75. PubMed ID: 10368435
[TBL] [Abstract][Full Text] [Related]
15. Codon Usage Selection Can Bias Estimation of the Fraction of Adaptive Amino Acid Fixations.
Matsumoto T; John A; Baeza-Centurion P; Li B; Akashi H
Mol Biol Evol; 2016 Jun; 33(6):1580-9. PubMed ID: 26873577
[TBL] [Abstract][Full Text] [Related]
16. [Analysis of factors shaping S. pneumoniae codon usage].
Hou ZC; Yang N
Yi Chuan Xue Bao; 2002; 29(8):747-52. PubMed ID: 12200868
[TBL] [Abstract][Full Text] [Related]
17. Codon usage and gene expression level in Dictyostelium discoideum: highly expressed genes do 'prefer' optimal codons.
Sharp PM; Devine KM
Nucleic Acids Res; 1989 Jul; 17(13):5029-39. PubMed ID: 2762118
[TBL] [Abstract][Full Text] [Related]
18. Selective forces and mutational biases drive stop codon usage in the human genome: a comparison with sense codon usage.
Trotta E
BMC Genomics; 2016 May; 17():366. PubMed ID: 27188984
[TBL] [Abstract][Full Text] [Related]
19. Codon Usage Differences among Genes Expressed in Different Tissues of Drosophila melanogaster.
Payne BL; Alvarez-Ponce D
Genome Biol Evol; 2019 Apr; 11(4):1054-1065. PubMed ID: 30859203
[TBL] [Abstract][Full Text] [Related]
20. Determinants of synonymous and nonsynonymous variability in three species of Drosophila.
Haddrill PR; Zeng K; Charlesworth B
Mol Biol Evol; 2011 May; 28(5):1731-43. PubMed ID: 21191087
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
