These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
140 related articles for article (PubMed ID: 31504190)
1. DDAP: docking domain affinity and biosynthetic pathway prediction tool for type I polyketide synthases. Li T; Tripathi A; Yu F; Sherman DH; Rao A Bioinformatics; 2020 Feb; 36(3):942-944. PubMed ID: 31504190 [TBL] [Abstract][Full Text] [Related]
2. Iterative polyketide biosynthesis by modular polyketide synthases in bacteria. Chen H; Du L Appl Microbiol Biotechnol; 2016 Jan; 100(2):541-57. PubMed ID: 26549236 [TBL] [Abstract][Full Text] [Related]
3. A machine learning-based method for prediction of macrocyclization patterns of polyketides and non-ribosomal peptides. Agrawal P; Mohanty D Bioinformatics; 2021 May; 37(5):603-611. PubMed ID: 33010151 [TBL] [Abstract][Full Text] [Related]
4. Sequence-based classification of type II polyketide synthase biosynthetic gene clusters for antiSMASH. Villebro R; Shaw S; Blin K; Weber T J Ind Microbiol Biotechnol; 2019 Mar; 46(3-4):469-475. PubMed ID: 30610412 [TBL] [Abstract][Full Text] [Related]
5. PKMiner: a database for exploring type II polyketide synthases. Kim J; Yi GS BMC Microbiol; 2012 Aug; 12():169. PubMed ID: 22871112 [TBL] [Abstract][Full Text] [Related]
6. Coevolution-based prediction of protein-protein interactions in polyketide biosynthetic assembly lines. Wang Y; Correa Marrero M; Medema MH; van Dijk ADJ Bioinformatics; 2020 Dec; 36(19):4846-4853. PubMed ID: 32592463 [TBL] [Abstract][Full Text] [Related]
7. Metabolic pathway assembly using docking domains from type I cis-AT polyketide synthases. Sun X; Yuan Y; Chen Q; Nie S; Guo J; Ou Z; Huang M; Deng Z; Liu T; Ma T Nat Commun; 2022 Sep; 13(1):5541. PubMed ID: 36130947 [TBL] [Abstract][Full Text] [Related]
9. SBSPKS: structure based sequence analysis of polyketide synthases. Anand S; Prasad MV; Yadav G; Kumar N; Shehara J; Ansari MZ; Mohanty D Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W487-96. PubMed ID: 20444870 [TBL] [Abstract][Full Text] [Related]
10. Kernel based machine learning algorithm for the efficient prediction of type III polyketide synthase family of proteins. Mallika V; Sivakumar KC; Jaichand S; Soniya EV J Integr Bioinform; 2010 Jul; 7(1):. PubMed ID: 20625199 [TBL] [Abstract][Full Text] [Related]
11. Towards improved understanding of intersubunit interactions in modular polyketide biosynthesis: Docking in the enacyloxin IIa polyketide synthase. Risser F; Collin S; Dos Santos-Morais R; Gruez A; Chagot B; Weissman KJ J Struct Biol; 2020 Oct; 212(1):107581. PubMed ID: 32717326 [TBL] [Abstract][Full Text] [Related]
12. Towards prediction of metabolic products of polyketide synthases: an in silico analysis. Yadav G; Gokhale RS; Mohanty D PLoS Comput Biol; 2009 Apr; 5(4):e1000351. PubMed ID: 19360130 [TBL] [Abstract][Full Text] [Related]
13. Prediction of inter domain interactions in modular polyketide synthases by docking and correlated mutation analysis. Yadav G; Anand S; Mohanty D J Biomol Struct Dyn; 2013; 31(1):17-29. PubMed ID: 22803697 [TBL] [Abstract][Full Text] [Related]
14. Reconstitution of the FK228 biosynthetic pathway reveals cross talk between modular polyketide synthases and fatty acid synthase. Wesener SR; Potharla VY; Cheng YQ Appl Environ Microbiol; 2011 Feb; 77(4):1501-7. PubMed ID: 21183648 [TBL] [Abstract][Full Text] [Related]
15. Biosynthesis of polyketides by Chen H; Bian Z; Ravichandran V; Li R; Sun Y; Huo L; Fu J; Bian X; Xia L; Tu Q; Zhang Y Crit Rev Microbiol; 2019 Mar; 45(2):162-181. PubMed ID: 31218924 [TBL] [Abstract][Full Text] [Related]
16. Salinipyrone and Pacificanone Are Biosynthetic By-products of the Rosamicin Polyketide Synthase. Awakawa T; Crüsemann M; Munguia J; Ziemert N; Nizet V; Fenical W; Moore BS Chembiochem; 2015 Jul; 16(10):1443-7. PubMed ID: 25930739 [TBL] [Abstract][Full Text] [Related]
17. Engineering of Chimeric Polyketide Synthases Using SYNZIP Docking Domains. Klaus M; D'Souza AD; Nivina A; Khosla C; Grininger M ACS Chem Biol; 2019 Mar; 14(3):426-433. PubMed ID: 30682239 [TBL] [Abstract][Full Text] [Related]
18. Comprehensive in Vitro Analysis of Acyltransferase Domain Exchanges in Modular Polyketide Synthases and Its Application for Short-Chain Ketone Production. Yuzawa S; Deng K; Wang G; Baidoo EE; Northen TR; Adams PD; Katz L; Keasling JD ACS Synth Biol; 2017 Jan; 6(1):139-147. PubMed ID: 27548700 [TBL] [Abstract][Full Text] [Related]
19. Modular Halogenation, α-Hydroxylation, and Acylation by a Remarkably Versatile Polyketide Synthase. Hemmerling F; Meoded RA; Fraley AE; Minas HA; Dieterich CL; Rust M; Ueoka R; Jensen K; Helfrich EJN; Bergande C; Biedermann M; Magnus N; Piechulla B; Piel J Angew Chem Int Ed Engl; 2022 Mar; 61(11):e202116614. PubMed ID: 35020279 [TBL] [Abstract][Full Text] [Related]
20. Discriminating the reaction types of plant type III polyketide synthases. Shimizu Y; Ogata H; Goto S Bioinformatics; 2017 Jul; 33(13):1937-1943. PubMed ID: 28334262 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]