These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 31504211)

  • 1. Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approach.
    Wu Y
    Bioinformatics; 2020 Feb; 36(3):742-750. PubMed ID: 31504211
    [TBL] [Abstract][Full Text] [Related]  

  • 2. STELLS2: fast and accurate coalescent-based maximum likelihood inference of species trees from gene tree topologies.
    Pei J; Wu Y
    Bioinformatics; 2017 Jun; 33(12):1789-1797. PubMed ID: 28186220
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inference of population admixture network from local gene genealogies: a coalescent-based maximum likelihood approach.
    Wu Y
    Bioinformatics; 2020 Jul; 36(Suppl_1):i326-i334. PubMed ID: 32657366
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Coalescent-based species tree inference from gene tree topologies under incomplete lineage sorting by maximum likelihood.
    Wu Y
    Evolution; 2012 Mar; 66(3):763-775. PubMed ID: 22380439
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An algorithm for computing the gene tree probability under the multispecies coalescent and its application in the inference of population tree.
    Wu Y
    Bioinformatics; 2016 Jun; 32(12):i225-i233. PubMed ID: 27307621
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Joint inference of cell lineage and mitochondrial evolution from single-cell sequencing data.
    Sashittal P; Chen V; Pasarkar A; Raphael BJ
    Bioinformatics; 2024 Jun; 40(Supplement_1):i218-i227. PubMed ID: 38940122
    [TBL] [Abstract][Full Text] [Related]  

  • 7. RENT+: an improved method for inferring local genealogical trees from haplotypes with recombination.
    Mirzaei S; Wu Y
    Bioinformatics; 2017 Apr; 33(7):1021-1030. PubMed ID: 28065901
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A coalescent-based method for population tree inference with haplotypes.
    Wu Y
    Bioinformatics; 2015 Mar; 31(5):691-8. PubMed ID: 25344500
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design.
    McCormack JE; Huang H; Knowles LL
    Syst Biol; 2009 Oct; 58(5):501-8. PubMed ID: 20525604
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Fast likelihood calculation for multivariate Gaussian phylogenetic models with shifts.
    Mitov V; Bartoszek K; Asimomitis G; Stadler T
    Theor Popul Biol; 2020 Feb; 131():66-78. PubMed ID: 31805292
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Scelestial: Fast and accurate single-cell lineage tree inference based on a Steiner tree approximation algorithm.
    Foroughmand-Araabi MH; Goliaei S; McHardy AC
    PLoS Comput Biol; 2022 Aug; 18(8):e1009100. PubMed ID: 35951662
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Maximum Likelihood Inference of Time-scaled Cell Lineage Trees with Mixed-type Missing Data.
    Mai U; Chu G; Raphael BJ
    bioRxiv; 2024 Mar; ():. PubMed ID: 38496496
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sampling and summarizing transmission trees with multi-strain infections.
    Sashittal P; El-Kebir M
    Bioinformatics; 2020 Jul; 36(Suppl_1):i362-i370. PubMed ID: 32657399
    [TBL] [Abstract][Full Text] [Related]  

  • 14. AMC: accurate mutation clustering from single-cell DNA sequencing data.
    Yu Z; Du F
    Bioinformatics; 2022 Mar; 38(6):1732-1734. PubMed ID: 34951625
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Reconstructing B cell lineage trees with minimum spanning tree and genotype abundances.
    Abdollahi N; Jeusset L; de Septenville A; Davi F; Bernardes JS
    BMC Bioinformatics; 2023 Feb; 24(1):70. PubMed ID: 36849917
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Improved inference of tandem domain duplications.
    Aluru C; Singh M
    Bioinformatics; 2021 Jul; 37(Suppl_1):i133-i141. PubMed ID: 34252920
    [TBL] [Abstract][Full Text] [Related]  

  • 17. NetRAX: accurate and fast maximum likelihood phylogenetic network inference.
    Lutteropp S; Scornavacca C; Kozlov AM; Morel B; Stamatakis A
    Bioinformatics; 2022 Aug; 38(15):3725-3733. PubMed ID: 35713506
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Maximum likelihood phylogeographic inference of cell motility and cell division from spatial lineage tracing data.
    Mai U; Hu G; Raphael BJ
    Bioinformatics; 2024 Jun; 40(Supplement_1):i228-i236. PubMed ID: 38940146
    [TBL] [Abstract][Full Text] [Related]  

  • 19. RobustClone: a robust PCA method for tumor clone and evolution inference from single-cell sequencing data.
    Chen Z; Gong F; Wan L; Ma L
    Bioinformatics; 2020 Jun; 36(11):3299-3306. PubMed ID: 32159762
    [TBL] [Abstract][Full Text] [Related]  

  • 20. LocalNgsRelate: a software tool for inferring IBD sharing along the genome between pairs of individuals from low-depth NGS data.
    Severson AL; Korneliussen TS; Moltke I
    Bioinformatics; 2022 Jan; 38(4):1159-1161. PubMed ID: 34718411
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.