222 related articles for article (PubMed ID: 31529043)
1. Biogenesis mechanisms of circular RNA can be categorized through feature extraction of a machine learning model.
Liu C; Liu YC; Huang HD; Wang W
Bioinformatics; 2019 Dec; 35(23):4867-4870. PubMed ID: 31529043
[TBL] [Abstract][Full Text] [Related]
2. circMeta: a unified computational framework for genomic feature annotation and differential expression analysis of circular RNAs.
Chen L; Wang F; Bruggeman EC; Li C; Yao B
Bioinformatics; 2020 Jan; 36(2):539-545. PubMed ID: 31373611
[TBL] [Abstract][Full Text] [Related]
3. PCirc: random forest-based plant circRNA identification software.
Yin S; Tian X; Zhang J; Sun P; Li G
BMC Bioinformatics; 2021 Jan; 22(1):10. PubMed ID: 33407069
[TBL] [Abstract][Full Text] [Related]
4. Deep learning of the back-splicing code for circular RNA formation.
Wang J; Wang L
Bioinformatics; 2019 Dec; 35(24):5235-5242. PubMed ID: 31077303
[TBL] [Abstract][Full Text] [Related]
5. Diverse alternative back-splicing and alternative splicing landscape of circular RNAs.
Zhang XO; Dong R; Zhang Y; Zhang JL; Luo Z; Zhang J; Chen LL; Yang L
Genome Res; 2016 Sep; 26(9):1277-87. PubMed ID: 27365365
[TBL] [Abstract][Full Text] [Related]
6. Ambiguous splice sites distinguish circRNA and linear splicing in the human genome.
Dehghannasiri R; Szabo L; Salzman J
Bioinformatics; 2019 Apr; 35(8):1263-1268. PubMed ID: 30192918
[TBL] [Abstract][Full Text] [Related]
7. JEDI: circular RNA prediction based on junction encoders and deep interaction among splice sites.
Jiang JY; Ju CJ; Hao J; Chen M; Wang W
Bioinformatics; 2021 Jul; 37(Suppl_1):i289-i298. PubMed ID: 34252942
[TBL] [Abstract][Full Text] [Related]
8. Circular RNAs: Biogenesis, Mechanism, and Function in Human Cancers.
Zhao X; Cai Y; Xu J
Int J Mol Sci; 2019 Aug; 20(16):. PubMed ID: 31412535
[TBL] [Abstract][Full Text] [Related]
9. Knockout of circRNAs by base editing back-splice sites of circularized exons.
Gao X; Ma XK; Li X; Li GW; Liu CX; Zhang J; Wang Y; Wei J; Chen J; Chen LL; Yang L
Genome Biol; 2022 Jan; 23(1):16. PubMed ID: 35012611
[TBL] [Abstract][Full Text] [Related]
10. Identifying Circular RNA and Predicting Its Regulatory Interactions by Machine Learning.
Zhang G; Deng Y; Liu Q; Ye B; Dai Z; Chen Y; Dai X
Front Genet; 2020; 11():655. PubMed ID: 32849764
[TBL] [Abstract][Full Text] [Related]
11. The interplay between microRNA and alternative splicing of linear and circular RNAs in eleven plant species.
Wang H; Wang H; Zhang H; Liu S; Wang Y; Gao Y; Xi F; Zhao L; Liu B; Reddy ASN; Lin C; Gu L
Bioinformatics; 2019 Sep; 35(17):3119-3126. PubMed ID: 30689723
[TBL] [Abstract][Full Text] [Related]
12. Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.
Ivanov A; Memczak S; Wyler E; Torti F; Porath HT; Orejuela MR; Piechotta M; Levanon EY; Landthaler M; Dieterich C; Rajewsky N
Cell Rep; 2015 Jan; 10(2):170-7. PubMed ID: 25558066
[TBL] [Abstract][Full Text] [Related]
13. The Biogenesis, Functions, and Challenges of Circular RNAs.
Li X; Yang L; Chen LL
Mol Cell; 2018 Aug; 71(3):428-442. PubMed ID: 30057200
[TBL] [Abstract][Full Text] [Related]
14. circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier.
Li H; Deng Z; Yang H; Pan X; Wei Z; Shen HB; Choi KS; Wang L; Wang S; Wu J
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34571539
[TBL] [Abstract][Full Text] [Related]
15. CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs.
Dudekula DB; Panda AC; Grammatikakis I; De S; Abdelmohsen K; Gorospe M
RNA Biol; 2016; 13(1):34-42. PubMed ID: 26669964
[TBL] [Abstract][Full Text] [Related]
16. SpliceV: analysis and publication quality printing of linear and circular RNA splicing, expression and regulation.
Ungerleider N; Flemington E
BMC Bioinformatics; 2019 May; 20(1):231. PubMed ID: 31068132
[TBL] [Abstract][Full Text] [Related]
17. circtools-a one-stop software solution for circular RNA research.
Jakobi T; Uvarovskii A; Dieterich C
Bioinformatics; 2019 Jul; 35(13):2326-2328. PubMed ID: 30462173
[TBL] [Abstract][Full Text] [Related]
18. Identification and characterization of circular RNAs in zebrafish.
Shen Y; Guo X; Wang W
FEBS Lett; 2017 Jan; 591(1):213-220. PubMed ID: 27878987
[TBL] [Abstract][Full Text] [Related]
19. Rolling Circle cDNA Synthesis Uncovers Circular RNA Splice Variants.
Das A; Rout PK; Gorospe M; Panda AC
Int J Mol Sci; 2019 Aug; 20(16):. PubMed ID: 31426285
[TBL] [Abstract][Full Text] [Related]
20. A machine learning framework for accurately recognizing circular RNAs for clinical decision-supporting.
Wang Y; Zhang X; Wang T; Xing J; Wu Z; Li W; Wang J
BMC Med Inform Decis Mak; 2020 Jul; 20(Suppl 3):137. PubMed ID: 32646420
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
