246 related articles for article (PubMed ID: 31557052)
1. Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach.
Barupal DK; Fiehn O
Environ Health Perspect; 2019 Sep; 127(9):97008. PubMed ID: 31557052
[TBL] [Abstract][Full Text] [Related]
2. Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data.
Marco-Ramell A; Palau-Rodriguez M; Alay A; Tulipani S; Urpi-Sarda M; Sanchez-Pla A; Andres-Lacueva C
BMC Bioinformatics; 2018 Jan; 19(1):1. PubMed ID: 29291722
[TBL] [Abstract][Full Text] [Related]
3. The human microbial exposome: expanding the Exposome-Explorer database with gut microbial metabolites.
Neveu V; Nicolas G; Amara A; Salek RM; Scalbert A
Sci Rep; 2023 Feb; 13(1):1946. PubMed ID: 36732606
[TBL] [Abstract][Full Text] [Related]
4. Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the comparative toxicogenomics database.
Davis AP; Wiegers TC; Johnson RJ; Lay JM; Lennon-Hopkins K; Saraceni-Richards C; Sciaky D; Murphy CG; Mattingly CJ
PLoS One; 2013; 8(4):e58201. PubMed ID: 23613709
[TBL] [Abstract][Full Text] [Related]
5. How large is the metabolome? A critical analysis of data exchange practices in chemistry.
Kind T; Scholz M; Fiehn O
PLoS One; 2009; 4(5):e5440. PubMed ID: 19415114
[TBL] [Abstract][Full Text] [Related]
6. Comparison of maternal venous blood metabolomics collected as dried blood spots, dried blood microsamplers, and plasma for integrative environmental health research.
Petrick L; Guan H; Page GP; Dolios G; Niedzwiecki MM; Wright RO; Wright RJ;
Environ Int; 2024 May; 187():108663. PubMed ID: 38657407
[TBL] [Abstract][Full Text] [Related]
7. Blurred lines: Crossing the boundaries between the chemical exposome and the metabolome.
Balcells C; Xu Y; Gil-Solsona R; Maitre L; Gago-Ferrero P; Keun HC
Curr Opin Chem Biol; 2024 Feb; 78():102407. PubMed ID: 38086287
[TBL] [Abstract][Full Text] [Related]
8. HMDB 4.0: the human metabolome database for 2018.
Wishart DS; Feunang YD; Marcu A; Guo AC; Liang K; Vázquez-Fresno R; Sajed T; Johnson D; Li C; Karu N; Sayeeda Z; Lo E; Assempour N; Berjanskii M; Singhal S; Arndt D; Liang Y; Badran H; Grant J; Serra-Cayuela A; Liu Y; Mandal R; Neveu V; Pon A; Knox C; Wilson M; Manach C; Scalbert A
Nucleic Acids Res; 2018 Jan; 46(D1):D608-D617. PubMed ID: 29140435
[TBL] [Abstract][Full Text] [Related]
9. Text-mining clinically relevant cancer biomarkers for curation into the CIViC database.
Lever J; Jones MR; Danos AM; Krysiak K; Bonakdar M; Grewal JK; Culibrk L; Griffith OL; Griffith M; Jones SJM
Genome Med; 2019 Dec; 11(1):78. PubMed ID: 31796060
[TBL] [Abstract][Full Text] [Related]
10. Mining locus tags in PubMed Central to improve microbial gene annotation.
Stubben CJ; Challacombe JF
BMC Bioinformatics; 2014 Feb; 15():43. PubMed ID: 24499370
[TBL] [Abstract][Full Text] [Related]
11. Exposome-Explorer 2.0: an update incorporating candidate dietary biomarkers and dietary associations with cancer risk.
Neveu V; Nicolas G; Salek RM; Wishart DS; Scalbert A
Nucleic Acids Res; 2020 Jan; 48(D1):D908-D912. PubMed ID: 31724701
[TBL] [Abstract][Full Text] [Related]
12. Searching for LINCS to Stress: Using Text Mining to Automate Reference Chemical Curation.
Chambers BA; Basili D; Word L; Baker N; Middleton A; Judson RS; Shah I
Chem Res Toxicol; 2024 Jun; 37(6):878-893. PubMed ID: 38736322
[TBL] [Abstract][Full Text] [Related]
13. Literature information in PubChem: associations between PubChem records and scientific articles.
Kim S; Thiessen PA; Cheng T; Yu B; Shoemaker BA; Wang J; Bolton EE; Wang Y; Bryant SH
J Cheminform; 2016; 8():32. PubMed ID: 27293485
[TBL] [Abstract][Full Text] [Related]
14. Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics--database and tools update.
Bais P; Moon-Quanbeck SM; Nikolau BJ; Dickerson JA
Nucleic Acids Res; 2012 Jan; 40(Database issue):D1216-20. PubMed ID: 22080512
[TBL] [Abstract][Full Text] [Related]
15. Exploring applications of non-targeted analysis in the characterization of the prenatal exposome.
Bland GD; Abrahamsson D; Wang M; Zlatnik MG; Morello-Frosch R; Park JS; Sirota M; Woodruff TJ
Sci Total Environ; 2024 Feb; 912():169458. PubMed ID: 38142008
[TBL] [Abstract][Full Text] [Related]
16. PubChem synonym filtering process using crowdsourcing.
Kim S; Yu B; Li Q; Bolton EE
J Cheminform; 2024 Jun; 16(1):69. PubMed ID: 38880887
[TBL] [Abstract][Full Text] [Related]
17. Text mining and portal development for gene-specific publications on Alzheimer's disease and other neurodegenerative diseases.
Liu J; Wu H; Robertson DH; Zhang J
BMC Med Inform Decis Mak; 2024 Apr; 24(Suppl 3):98. PubMed ID: 38632621
[TBL] [Abstract][Full Text] [Related]
18. IDPpub: Illuminating the Dark Phosphoproteome Through PubMed Mining.
Savage SR; Zhang Y; Jaehnig EJ; Liao Y; Shi Z; Pham HA; Xu H; Zhang B
Mol Cell Proteomics; 2024 Jan; 23(1):100682. PubMed ID: 37993103
[TBL] [Abstract][Full Text] [Related]
19. The NORMAN Suspect List Exchange (NORMAN-SLE): facilitating European and worldwide collaboration on suspect screening in high resolution mass spectrometry.
Mohammed Taha H; Aalizadeh R; Alygizakis N; Antignac JP; Arp HPH; Bade R; Baker N; Belova L; Bijlsma L; Bolton EE; Brack W; Celma A; Chen WL; Cheng T; Chirsir P; Čirka Ľ; D'Agostino LA; Djoumbou Feunang Y; Dulio V; Fischer S; Gago-Ferrero P; Galani A; Geueke B; Głowacka N; Glüge J; Groh K; Grosse S; Haglund P; Hakkinen PJ; Hale SE; Hernandez F; Janssen EM; Jonkers T; Kiefer K; Kirchner M; Koschorreck J; Krauss M; Krier J; Lamoree MH; Letzel M; Letzel T; Li Q; Little J; Liu Y; Lunderberg DM; Martin JW; McEachran AD; McLean JA; Meier C; Meijer J; Menger F; Merino C; Muncke J; Muschket M; Neumann M; Neveu V; Ng K; Oberacher H; O'Brien J; Oswald P; Oswaldova M; Picache JA; Postigo C; Ramirez N; Reemtsma T; Renaud J; Rostkowski P; Rüdel H; Salek RM; Samanipour S; Scheringer M; Schliebner I; Schulz W; Schulze T; Sengl M; Shoemaker BA; Sims K; Singer H; Singh RR; Sumarah M; Thiessen PA; Thomas KV; Torres S; Trier X; van Wezel AP; Vermeulen RCH; Vlaanderen JJ; von der Ohe PC; Wang Z; Williams AJ; Willighagen EL; Wishart DS; Zhang J; Thomaidis NS; Hollender J; Slobodnik J; Schymanski EL
Environ Sci Eur; 2022; 34(1):104. PubMed ID: 36284750
[TBL] [Abstract][Full Text] [Related]
20. Adding open spectral data to MassBank and PubChem using open source tools to support non-targeted exposomics of mixtures.
Elapavalore A; Kondić T; Singh RR; Shoemaker BA; Thiessen PA; Zhang J; Bolton EE; Schymanski EL
Environ Sci Process Impacts; 2023 Nov; 25(11):1788-1801. PubMed ID: 37431591
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]