BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 31583627)

  • 1. Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol.
    Raja K; Natarajan J; Kuusisto F; Steill J; Ross I; Thomson J; Stewart R
    Methods Mol Biol; 2020; 2074():13-34. PubMed ID: 31583627
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PPInterFinder--a mining tool for extracting causal relations on human proteins from literature.
    Raja K; Subramani S; Natarajan J
    Database (Oxford); 2013; 2013():bas052. PubMed ID: 23325628
    [TBL] [Abstract][Full Text] [Related]  

  • 3. HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways.
    Subramani S; Kalpana R; Monickaraj PM; Natarajan J
    J Biomed Inform; 2015 Apr; 54():121-31. PubMed ID: 25659452
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ProNormz--an integrated approach for human proteins and protein kinases normalization.
    Subramani S; Raja K; Natarajan J
    J Biomed Inform; 2014 Feb; 47():131-8. PubMed ID: 24144801
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
    Islamaj Dogan R; Kim S; Chatr-Aryamontri A; Wei CH; Comeau DC; Antunes R; Matos S; Chen Q; Elangovan A; Panyam NC; Verspoor K; Liu H; Wang Y; Liu Z; Altinel B; Hüsünbeyi ZM; Özgür A; Fergadis A; Wang CK; Dai HJ; Tran T; Kavuluru R; Luo L; Steppi A; Zhang J; Qu J; Lu Z
    Database (Oxford); 2019 Jan; 2019():. PubMed ID: 30689846
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The eFIP system for text mining of protein interaction networks of phosphorylated proteins.
    Tudor CO; Arighi CN; Wang Q; Wu CH; Vijay-Shanker K
    Database (Oxford); 2012; 2012():bas044. PubMed ID: 23221174
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Overview of the BioCreative III Workshop.
    Arighi CN; Lu Z; Krallinger M; Cohen KB; Wilbur WJ; Valencia A; Hirschman L; Wu CH
    BMC Bioinformatics; 2011 Oct; 12 Suppl 8(Suppl 8):S1. PubMed ID: 22151647
    [TBL] [Abstract][Full Text] [Related]  

  • 8. PPIExtractor: a protein interaction extraction and visualization system for biomedical literature.
    Yang Z; Zhao Z; Li Y; Hu Y; Lin H
    IEEE Trans Nanobioscience; 2013 Sep; 12(3):173-81. PubMed ID: 23974658
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Visualization of protein interaction networks: problems and solutions.
    Agapito G; Guzzi PH; Cannataro M
    BMC Bioinformatics; 2013; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23368786
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PPI finder: a mining tool for human protein-protein interactions.
    He M; Wang Y; Li W
    PLoS One; 2009; 4(2):e4554. PubMed ID: 19234603
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Dynamic programming re-ranking for PPI interactor and pair extraction in full-text articles.
    Tsai RT; Lai PT
    BMC Bioinformatics; 2011 Feb; 12():60. PubMed ID: 21342534
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
    Krallinger M; Vazquez M; Leitner F; Salgado D; Chatr-Aryamontri A; Winter A; Perfetto L; Briganti L; Licata L; Iannuccelli M; Castagnoli L; Cesareni G; Tyers M; Schneider G; Rinaldi F; Leaman R; Gonzalez G; Matos S; Kim S; Wilbur WJ; Rocha L; Shatkay H; Tendulkar AV; Agarwal S; Liu F; Wang X; Rak R; Noto K; Elkan C; Lu Z; Dogan RI; Fontaine JF; Andrade-Navarro MA; Valencia A
    BMC Bioinformatics; 2011 Oct; 12 Suppl 8(Suppl 8):S3. PubMed ID: 22151929
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge.
    Krallinger M; Morgan A; Smith L; Leitner F; Tanabe L; Wilbur J; Hirschman L; Valencia A
    Genome Biol; 2008; 9 Suppl 2(Suppl 2):S1. PubMed ID: 18834487
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PINOT: an intuitive resource for integrating protein-protein interactions.
    Tomkins JE; Ferrari R; Vavouraki N; Hardy J; Lovering RC; Lewis PA; McGuffin LJ; Manzoni C
    Cell Commun Signal; 2020 Jun; 18(1):92. PubMed ID: 32527260
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Towards Extracting Supporting Information About Predicted Protein-Protein Interactions.
    Roth A; Subramanian S; Ganapathiraju MK
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(4):1239-1246. PubMed ID: 26672046
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mining physical protein-protein interactions from the literature.
    Huang M; Ding S; Wang H; Zhu X
    Genome Biol; 2008; 9 Suppl 2(Suppl 2):S12. PubMed ID: 18834490
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data.
    Doncheva NT; Morris JH; Gorodkin J; Jensen LJ
    J Proteome Res; 2019 Feb; 18(2):623-632. PubMed ID: 30450911
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The Intrinsic Geometric Structure of Protein-Protein Interaction Networks for Protein Interaction Prediction.
    Fang Y; Sun M; Dai G; Ramain K
    IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(1):76-85. PubMed ID: 26886733
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Network Tools for the Analysis of Proteomic Data.
    Chisanga D; Keerthikumar S; Mathivanan S; Chilamkurti N
    Methods Mol Biol; 2017; 1549():177-197. PubMed ID: 27975292
    [TBL] [Abstract][Full Text] [Related]  

  • 20. IIIDB: a database for isoform-isoform interactions and isoform network modules.
    Tseng YT; Li W; Chen CH; Zhang S; Chen JJ; Zhou X; Liu CC
    BMC Genomics; 2015; 16 Suppl 2(Suppl 2):S10. PubMed ID: 25707505
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.