BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

212 related articles for article (PubMed ID: 31584092)

  • 21. Unified access to up-to-date residue-level annotations from UniProtKB and other biological databases for PDB data.
    Choudhary P; Anyango S; Berrisford J; Tolchard J; Varadi M; Velankar S
    Sci Data; 2023 Apr; 10(1):204. PubMed ID: 37045837
    [TBL] [Abstract][Full Text] [Related]  

  • 22. PDBWiki: added value through community annotation of the Protein Data Bank.
    Stehr H; Duarte JM; Lappe M; Bhak J; Bolser DM
    Database (Oxford); 2010 Jul; 2010():baq009. PubMed ID: 20624717
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Web-based visualisation and analysis of 3D electron-microscopy data from EMDB and PDB.
    Lagerstedt I; Moore WJ; Patwardhan A; Sanz-García E; Best C; Swedlow JR; Kleywegt GJ
    J Struct Biol; 2013 Nov; 184(2):173-81. PubMed ID: 24113529
    [TBL] [Abstract][Full Text] [Related]  

  • 24. UniProt: the universal protein knowledgebase in 2021.
    UniProt Consortium
    Nucleic Acids Res; 2021 Jan; 49(D1):D480-D489. PubMed ID: 33237286
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Unified data resource for cryo-EM.
    Lawson CL
    Methods Enzymol; 2010; 483():73-90. PubMed ID: 20888470
    [TBL] [Abstract][Full Text] [Related]  

  • 26. ProSAT+: visualizing sequence annotations on 3D structure.
    Stank A; Richter S; Wade RC
    Protein Eng Des Sel; 2016 Aug; 29(8):281-4. PubMed ID: 27284084
    [TBL] [Abstract][Full Text] [Related]  

  • 27. CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.
    Chen X; Laudeman TW; Rushton PJ; Spraggins TA; Timko MP
    BMC Bioinformatics; 2007 Apr; 8():129. PubMed ID: 17445272
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Straightforward and complete deposition of NMR data to the PDBe.
    Penkett CJ; van Ginkel G; Velankar S; Swaminathan J; Ulrich EL; Mading S; Stevens TJ; Fogh RH; Gutmanas A; Kleywegt GJ; Henrick K; Vranken WF
    J Biomol NMR; 2010 Oct; 48(2):85-92. PubMed ID: 20680401
    [TBL] [Abstract][Full Text] [Related]  

  • 29. UniProt: the Universal Protein Knowledgebase in 2023.
    UniProt Consortium
    Nucleic Acids Res; 2023 Jan; 51(D1):D523-D531. PubMed ID: 36408920
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Three-dimensional Structure Databases of Biological Macromolecules.
    Waman VP; Orengo C; Kleywegt GJ; Lesk AM
    Methods Mol Biol; 2022; 2449():43-91. PubMed ID: 35507259
    [TBL] [Abstract][Full Text] [Related]  

  • 31. PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology.
    Westbrook JD; Young JY; Shao C; Feng Z; Guranovic V; Lawson CL; Vallat B; Adams PD; Berrisford JM; Bricogne G; Diederichs K; Joosten RP; Keller P; Moriarty NW; Sobolev OV; Velankar S; Vonrhein C; Waterman DG; Kurisu G; Berman HM; Burley SK; Peisach E
    J Mol Biol; 2022 Jun; 434(11):167599. PubMed ID: 35460671
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Mapping PDB chains to UniProtKB entries.
    Martin AC
    Bioinformatics; 2005 Dec; 21(23):4297-301. PubMed ID: 16188924
    [TBL] [Abstract][Full Text] [Related]  

  • 33. The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods.
    Gabanyi MJ; Adams PD; Arnold K; Bordoli L; Carter LG; Flippen-Andersen J; Gifford L; Haas J; Kouranov A; McLaughlin WA; Micallef DI; Minor W; Shah R; Schwede T; Tao YP; Westbrook JD; Zimmerman M; Berman HM
    J Struct Funct Genomics; 2011 Jul; 12(2):45-54. PubMed ID: 21472436
    [TBL] [Abstract][Full Text] [Related]  

  • 34. OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive.
    Young JY; Westbrook JD; Feng Z; Sala R; Peisach E; Oldfield TJ; Sen S; Gutmanas A; Armstrong DR; Berrisford JM; Chen L; Chen M; Di Costanzo L; Dimitropoulos D; Gao G; Ghosh S; Gore S; Guranovic V; Hendrickx PMS; Hudson BP; Igarashi R; Ikegawa Y; Kobayashi N; Lawson CL; Liang Y; Mading S; Mak L; Mir MS; Mukhopadhyay A; Patwardhan A; Persikova I; Rinaldi L; Sanz-Garcia E; Sekharan MR; Shao C; Swaminathan GJ; Tan L; Ulrich EL; van Ginkel G; Yamashita R; Yang H; Zhuravleva MA; Quesada M; Kleywegt GJ; Berman HM; Markley JL; Nakamura H; Velankar S; Burley SK
    Structure; 2017 Mar; 25(3):536-545. PubMed ID: 28190782
    [TBL] [Abstract][Full Text] [Related]  

  • 35. PDB-tools web: A user-friendly interface for the manipulation of PDB files.
    Jiménez-García B; Teixeira JMC; Trellet M; Rodrigues JPGLM; Bonvin AMJJ
    Proteins; 2021 Mar; 89(3):330-335. PubMed ID: 33111403
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The European Bioinformatics Institute in 2018: tools, infrastructure and training.
    Cook CE; Lopez R; Stroe O; Cochrane G; Brooksbank C; Birney E; Apweiler R
    Nucleic Acids Res; 2019 Jan; 47(D1):D15-D22. PubMed ID: 30445657
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Protein Structure Databases.
    Laskowski RA
    Methods Mol Biol; 2016; 1415():31-53. PubMed ID: 27115626
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Database citation in full text biomedical articles.
    Kafkas Ş; Kim JH; McEntyre JR
    PLoS One; 2013; 8(5):e63184. PubMed ID: 23734176
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Protein Data Bank Japan: Celebrating our 20th anniversary during a global pandemic as the Asian hub of three dimensional macromolecular structural data.
    Bekker GJ; Yokochi M; Suzuki H; Ikegawa Y; Iwata T; Kudou T; Yura K; Fujiwara T; Kawabata T; Kurisu G
    Protein Sci; 2022 Jan; 31(1):173-186. PubMed ID: 34664328
    [TBL] [Abstract][Full Text] [Related]  

  • 40. The RCSB Protein Data Bank: new resources for research and education.
    Rose PW; Bi C; Bluhm WF; Christie CH; Dimitropoulos D; Dutta S; Green RK; Goodsell DS; Prlic A; Quesada M; Quinn GB; Ramos AG; Westbrook JD; Young J; Zardecki C; Berman HM; Bourne PE
    Nucleic Acids Res; 2013 Jan; 41(Database issue):D475-82. PubMed ID: 23193259
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.