163 related articles for article (PubMed ID: 31584168)
1. The Mobilome: Metagenomic Analysis of Circular Plasmids, Viruses, and Other Extrachromosomal Elements.
Browne PD; Kot W; Jørgensen TS; Hansen LH
Methods Mol Biol; 2020; 2075():253-264. PubMed ID: 31584168
[TBL] [Abstract][Full Text] [Related]
2. Horizontal gene transfer and mobile genetic elements in marine systems.
Sobecky PA; Hazen TH
Methods Mol Biol; 2009; 532():435-53. PubMed ID: 19271200
[TBL] [Abstract][Full Text] [Related]
3. mobileOG-db: a Manually Curated Database of Protein Families Mediating the Life Cycle of Bacterial Mobile Genetic Elements.
Brown CL; Mullet J; Hindi F; Stoll JE; Gupta S; Choi M; Keenum I; Vikesland P; Pruden A; Zhang L
Appl Environ Microbiol; 2022 Sep; 88(18):e0099122. PubMed ID: 36036594
[TBL] [Abstract][Full Text] [Related]
4. Current strategies for mobilome research.
Jørgensen TS; Kiil AS; Hansen MA; Sørensen SJ; Hansen LH
Front Microbiol; 2014; 5():750. PubMed ID: 25657641
[TBL] [Abstract][Full Text] [Related]
5. Identification of Extrachromosomal Circular Forms of Active Transposable Elements Using Mobilome-Seq.
Lanciano S; Zhang P; Llauro C; Mirouze M
Methods Mol Biol; 2021; 2250():87-93. PubMed ID: 33900594
[TBL] [Abstract][Full Text] [Related]
6. Precise genotyping of circular mobile elements from metagenomic data uncovers human-associated plasmids with recent common ancestors.
Shalon N; Relman DA; Yaffe E
Genome Res; 2022 May; 32(5):986-1003. PubMed ID: 35414589
[TBL] [Abstract][Full Text] [Related]
7. Metamobilomics--expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing.
Li LL; Norman A; Hansen LH; Sørensen SJ
Clin Microbiol Infect; 2012 Jul; 18 Suppl 4():5-7. PubMed ID: 22647039
[TBL] [Abstract][Full Text] [Related]
8. PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures.
Krawczyk PS; Lipinski L; Dziembowski A
Nucleic Acids Res; 2018 Apr; 46(6):e35. PubMed ID: 29346586
[TBL] [Abstract][Full Text] [Related]
9. A method for purifying high quality and high yield plasmid DNA for metagenomic and deep sequencing approaches.
Brown Kav A; Benhar I; Mizrahi I
J Microbiol Methods; 2013 Nov; 95(2):272-9. PubMed ID: 24055388
[TBL] [Abstract][Full Text] [Related]
10. Genomic and metagenomic technologies to explore the antibiotic resistance mobilome.
Martínez JL; Coque TM; Lanza VF; de la Cruz F; Baquero F
Ann N Y Acad Sci; 2017 Jan; 1388(1):26-41. PubMed ID: 27861983
[TBL] [Abstract][Full Text] [Related]
11. Defining the mobilome.
Siefert JL
Methods Mol Biol; 2009; 532():13-27. PubMed ID: 19271177
[TBL] [Abstract][Full Text] [Related]
12. Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome.
Jørgensen TS; Xu Z; Hansen MA; Sørensen SJ; Hansen LH
PLoS One; 2014; 9(2):e87924. PubMed ID: 24503942
[TBL] [Abstract][Full Text] [Related]
13. Plasmid detection and assembly in genomic and metagenomic data sets.
Antipov D; Raiko M; Lapidus A; Pevzner PA
Genome Res; 2019 Jun; 29(6):961-968. PubMed ID: 31048319
[TBL] [Abstract][Full Text] [Related]
14. Experimental support for multidrug resistance transfer potential in the preterm infant gut microbiota.
Hagbø M; Ravi A; Angell IL; Sunde M; Ludvigsen J; Diep DB; Foley SL; Vento M; Collado MC; Perez-Martinez G; Rudi K
Pediatr Res; 2020 Jul; 88(1):57-65. PubMed ID: 31261372
[TBL] [Abstract][Full Text] [Related]
15. An abyssal mobilome: viruses, plasmids and vesicles from deep-sea hydrothermal vents.
Lossouarn J; Dupont S; Gorlas A; Mercier C; Bienvenu N; Marguet E; Forterre P; Geslin C
Res Microbiol; 2015 Dec; 166(10):742-52. PubMed ID: 25911507
[TBL] [Abstract][Full Text] [Related]
16. Association of the gut microbiota mobilome with hospital location and birth weight in preterm infants.
Ravi A; Estensmo ELF; Abée-Lund TML; Foley SL; Allgaier B; Martin CR; Claud EC; Rudi K
Pediatr Res; 2017 Nov; 82(5):829-838. PubMed ID: 28665922
[TBL] [Abstract][Full Text] [Related]
17. SCAPP: an algorithm for improved plasmid assembly in metagenomes.
Pellow D; Zorea A; Probst M; Furman O; Segal A; Mizrahi I; Shamir R
Microbiome; 2021 Jun; 9(1):144. PubMed ID: 34172093
[TBL] [Abstract][Full Text] [Related]
18. Plasmids Shaped the Recent Emergence of the Major Nosocomial Pathogen Enterococcus faecium.
Arredondo-Alonso S; Top J; McNally A; Puranen S; Pesonen M; Pensar J; Marttinen P; Braat JC; Rogers MRC; van Schaik W; Kaski S; Willems RJL; Corander J; Schürch AC
mBio; 2020 Feb; 11(1):. PubMed ID: 32047136
[No Abstract] [Full Text] [Related]
19. Exploration of activated sludge resistome using metagenomics.
Yadav S; Kapley A
Sci Total Environ; 2019 Nov; 692():1155-1164. PubMed ID: 31539947
[TBL] [Abstract][Full Text] [Related]
20. Construction of Small-Insert and Large-Insert Metagenomic Libraries.
Simon C; Daniel R
Methods Mol Biol; 2017; 1539():1-12. PubMed ID: 27900680
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]