BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

920 related articles for article (PubMed ID: 31606085)

  • 1. Multiplexed quantitative phosphoproteomics of cell line and tissue samples.
    Kreuzer J; Edwards A; Haas W
    Methods Enzymol; 2019; 626():41-65. PubMed ID: 31606085
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Mass Spectrometry-Based Proteomics for Analysis of Hydrophilic Phosphopeptides.
    Tsai CF; Smith JS; Eiger DS; Martin K; Liu T; Smith RD; Shi T; Rajagopal S; Jacobs JM
    Methods Mol Biol; 2021; 2259():247-257. PubMed ID: 33687720
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MS3-IDQ: Utilizing MS3 Spectra beyond Quantification Yields Increased Coverage of the Phosphoproteome in Isobaric Tag Experiments.
    Berberich MJ; Paulo JA; Everley RA
    J Proteome Res; 2018 Apr; 17(4):1741-1747. PubMed ID: 29461835
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Deep Coverage of Global Protein Expression and Phosphorylation in Breast Tumor Cell Lines Using TMT 10-plex Isobaric Labeling.
    Huang FK; Zhang G; Lawlor K; Nazarian A; Philip J; Tempst P; Dephoure N; Neubert TA
    J Proteome Res; 2017 Mar; 16(3):1121-1132. PubMed ID: 28102081
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Deep Profiling of Proteome and Phosphoproteome by Isobaric Labeling, Extensive Liquid Chromatography, and Mass Spectrometry.
    Bai B; Tan H; Pagala VR; High AA; Ichhaporia VP; Hendershot L; Peng J
    Methods Enzymol; 2017; 585():377-395. PubMed ID: 28109439
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Quantifying Proteome and Protein Modifications in Activated T Cells by Multiplexed Isobaric Labeling Mass Spectrometry.
    Tan H; Blanco DB; Xie B; Li Y; Wu Z; Chi H; Peng J
    Methods Mol Biol; 2021; 2285():297-317. PubMed ID: 33928561
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Improving data quality and preserving HCD-generated reporter ions with EThcD for isobaric tag-based quantitative proteomics and proteome-wide PTM studies.
    Yu Q; Shi X; Feng Y; Kent KC; Li L
    Anal Chim Acta; 2017 May; 968():40-49. PubMed ID: 28395773
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Peptide Labeling Using Isobaric Tagging Reagents for Quantitative Phosphoproteomics.
    Cheng L; Pisitkun T; Knepper MA; Hoffert JD
    Methods Mol Biol; 2016; 1355():53-70. PubMed ID: 26584918
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Off-line high-pH reversed-phase fractionation for in-depth phosphoproteomics.
    Batth TS; Francavilla C; Olsen JV
    J Proteome Res; 2014 Dec; 13(12):6176-86. PubMed ID: 25338131
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Simultaneous quantification of protein phosphorylation sites using liquid chromatography-tandem mass spectrometry-based targeted proteomics: a linear algebra approach for isobaric phosphopeptides.
    Xu F; Yang T; Sheng Y; Zhong T; Yang M; Chen Y
    J Proteome Res; 2014 Dec; 13(12):5452-60. PubMed ID: 25403019
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Evaluating multiplexed quantitative phosphopeptide analysis on a hybrid quadrupole mass filter/linear ion trap/orbitrap mass spectrometer.
    Erickson BK; Jedrychowski MP; McAlister GC; Everley RA; Kunz R; Gygi SP
    Anal Chem; 2015 Jan; 87(2):1241-9. PubMed ID: 25521595
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Benchmarking common quantification strategies for large-scale phosphoproteomics.
    Hogrebe A; von Stechow L; Bekker-Jensen DB; Weinert BT; Kelstrup CD; Olsen JV
    Nat Commun; 2018 Mar; 9(1):1045. PubMed ID: 29535314
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Two Birds with One Stone: Parallel Quantification of Proteome and Phosphoproteome Using iTRAQ.
    Solari FA; Kollipara L; Sickmann A; Zahedi RP
    Methods Mol Biol; 2016; 1394():25-41. PubMed ID: 26700039
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Phosphopeptide Enrichment and LC-MS/MS Analysis to Study the Phosphoproteome of Recombinant Chinese Hamster Ovary Cells.
    Henry M; Coleman O; Prashant ; Clynes M; Meleady P
    Methods Mol Biol; 2017; 1603():195-208. PubMed ID: 28493132
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Advances in the analysis of protein phosphorylation.
    Paradela A; Albar JP
    J Proteome Res; 2008 May; 7(5):1809-18. PubMed ID: 18327898
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Nanoscale Solid-Phase Isobaric Labeling for Multiplexed Quantitative Phosphoproteomics.
    Ogata K; Tsai CF; Ishihama Y
    J Proteome Res; 2021 Aug; 20(8):4193-4202. PubMed ID: 34292731
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Identification, Quantification, and Site Localization of Protein Posttranslational Modifications via Mass Spectrometry-Based Proteomics.
    Ke M; Shen H; Wang L; Luo S; Lin L; Yang J; Tian R
    Adv Exp Med Biol; 2016; 919():345-382. PubMed ID: 27975226
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Optimized Workflow for Multiplexed Phosphorylation Analysis of TMT-Labeled Peptides Using High-Field Asymmetric Waveform Ion Mobility Spectrometry.
    Schweppe DK; Rusin SF; Gygi SP; Paulo JA
    J Proteome Res; 2020 Jan; 19(1):554-560. PubMed ID: 31799850
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry.
    Mertins P; Tang LC; Krug K; Clark DJ; Gritsenko MA; Chen L; Clauser KR; Clauss TR; Shah P; Gillette MA; Petyuk VA; Thomas SN; Mani DR; Mundt F; Moore RJ; Hu Y; Zhao R; Schnaubelt M; Keshishian H; Monroe ME; Zhang Z; Udeshi ND; Mani D; Davies SR; Townsend RR; Chan DW; Smith RD; Zhang H; Liu T; Carr SA
    Nat Protoc; 2018 Jul; 13(7):1632-1661. PubMed ID: 29988108
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Mass spectrometry-driven phosphoproteomics: patterning the systems biology mosaic.
    Jünger MA; Aebersold R
    Wiley Interdiscip Rev Dev Biol; 2014; 3(1):83-112. PubMed ID: 24902836
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 46.