These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

244 related articles for article (PubMed ID: 31636219)

  • 1. Repertoire-wide phylogenetic models of B cell molecular evolution reveal evolutionary signatures of aging and vaccination.
    Hoehn KB; Vander Heiden JA; Zhou JQ; Lunter G; Pybus OG; Kleinstein SH
    Proc Natl Acad Sci U S A; 2019 Nov; 116(45):22664-22672. PubMed ID: 31636219
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BRILIA: Integrated Tool for High-Throughput Annotation and Lineage Tree Assembly of B-Cell Repertoires.
    Lee DW; Khavrutskii IV; Wallqvist A; Bavari S; Cooper CL; Chaudhury S
    Front Immunol; 2016; 7():681. PubMed ID: 28144239
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Human B cell lineages associated with germinal centers following influenza vaccination are measurably evolving.
    Hoehn KB; Turner JS; Miller FI; Jiang R; Pybus OG; Ellebedy AH; Kleinstein SH
    Elife; 2021 Nov; 10():. PubMed ID: 34787567
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Signatures of selection in the human antibody repertoire: Selective sweeps, competing subclones, and neutral drift.
    Horns F; Vollmers C; Dekker CL; Quake SR
    Proc Natl Acad Sci U S A; 2019 Jan; 116(4):1261-1266. PubMed ID: 30622180
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Phylogenetic analysis of the human antibody repertoire reveals quantitative signatures of immune senescence and aging.
    de Bourcy CF; Angel CJ; Vollmers C; Dekker CL; Davis MM; Quake SR
    Proc Natl Acad Sci U S A; 2017 Jan; 114(5):1105-1110. PubMed ID: 28096374
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Diversity and Molecular Evolution of B-Cell Receptors during Infection.
    Hoehn KB; Fowler A; Lunter G; Pybus OG
    Mol Biol Evol; 2016 May; 33(5):1147-57. PubMed ID: 26802217
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Beyond Hot Spots: Biases in Antibody Somatic Hypermutation and Implications for Vaccine Design.
    Schramm CA; Douek DC
    Front Immunol; 2018; 9():1876. PubMed ID: 30154794
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Reconstructing B cell lineage trees with minimum spanning tree and genotype abundances.
    Abdollahi N; Jeusset L; de Septenville A; Davi F; Bernardes JS
    BMC Bioinformatics; 2023 Feb; 24(1):70. PubMed ID: 36849917
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparison of methods for phylogenetic B-cell lineage inference using time-resolved antibody repertoire simulations (AbSim).
    Yermanos A; Greiff V; Krautler NJ; Menzel U; Dounas A; Miho E; Oxenius A; Stadler T; Reddy ST
    Bioinformatics; 2017 Dec; 33(24):3938-3946. PubMed ID: 28968873
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Trade-offs in antibody repertoires to complex antigens.
    Childs LM; Baskerville EB; Cobey S
    Philos Trans R Soc Lond B Biol Sci; 2015 Sep; 370(1676):. PubMed ID: 26194759
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Memory persistence and differentiation into antibody-secreting cells accompanied by positive selection in longitudinal BCR repertoires.
    Mikelov A; Alekseeva EI; Komech EA; Staroverov DB; Turchaninova MA; Shugay M; Chudakov DM; Bazykin GA; Zvyagin IV
    Elife; 2022 Sep; 11():. PubMed ID: 36107479
    [TBL] [Abstract][Full Text] [Related]  

  • 12. High-Resolution Longitudinal Study of HIV-1 Env Vaccine-Elicited B Cell Responses to the Virus Primary Receptor Binding Site Reveals Affinity Maturation and Clonal Persistence.
    Wang Y; Sundling C; Wilson R; O'Dell S; Chen Y; Dai K; Phad GE; Zhu J; Xiao Y; Mascola JR; Karlsson Hedestam GB; Wyatt RT; Li Y
    J Immunol; 2016 May; 196(9):3729-43. PubMed ID: 27001953
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A Phylogenetic Codon Substitution Model for Antibody Lineages.
    Hoehn KB; Lunter G; Pybus OG
    Genetics; 2017 May; 206(1):417-427. PubMed ID: 28315836
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Repertoire Sequencing of B Cells Elucidates the Role of UNG and Mismatch Repair Proteins in Somatic Hypermutation in Humans.
    IJspeert H; van Schouwenburg PA; Pico-Knijnenburg I; Loeffen J; Brugieres L; Driessen GJ; Blattmann C; Suerink M; Januszkiewicz-Lewandowska D; Azizi AA; Seidel MG; Jacobs H; van der Burg M
    Front Immunol; 2019; 10():1913. PubMed ID: 31507588
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sequence intrinsic somatic mutation mechanisms contribute to affinity maturation of VRC01-class HIV-1 broadly neutralizing antibodies.
    Hwang JK; Wang C; Du Z; Meyers RM; Kepler TB; Neuberg D; Kwong PD; Mascola JR; Joyce MG; Bonsignori M; Haynes BF; Yeap LS; Alt FW
    Proc Natl Acad Sci U S A; 2017 Aug; 114(32):8614-8619. PubMed ID: 28747530
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An asymmetric antibody repertoire is shaped between plasmablasts and plasma cells after secondary immunization with (4-hydroxy-3-nitrophenyl)acetyl chicken γ-globulin.
    Tashiro Y; Murakami A; Goizuka R; Shimizu T; Kishimoto H; Azuma T
    Int Immunol; 2015 Dec; 27(12):609-20. PubMed ID: 26152273
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Somatic hypermutation shapes the antibody repertoire of memory B cells in humans.
    Meffre E; Catalan N; Seltz F; Fischer A; Nussenzweig MC; Durandy A
    J Exp Med; 2001 Aug; 194(3):375-8. PubMed ID: 11489956
    [TBL] [Abstract][Full Text] [Related]  

  • 18. cAb-Rep: A Database of Curated Antibody Repertoires for Exploring Antibody Diversity and Predicting Antibody Prevalence.
    Guo Y; Chen K; Kwong PD; Shapiro L; Sheng Z
    Front Immunol; 2019; 10():2365. PubMed ID: 31649674
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Reconciling repertoire shift with affinity maturation: the role of deleterious mutations.
    Shannon M; Mehr R
    J Immunol; 1999 Apr; 162(7):3950-6. PubMed ID: 10201914
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantifying evolutionary constraints on B-cell affinity maturation.
    McCoy CO; Bedford T; Minin VN; Bradley P; Robins H; Matsen FA
    Philos Trans R Soc Lond B Biol Sci; 2015 Sep; 370(1676):. PubMed ID: 26194758
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.