161 related articles for article (PubMed ID: 31666002)
1. Exploring effective approaches for haplotype block phasing.
Al Bkhetan Z; Zobel J; Kowalczyk A; Verspoor K; Goudey B
BMC Bioinformatics; 2019 Oct; 20(1):540. PubMed ID: 31666002
[TBL] [Abstract][Full Text] [Related]
2. Phasing quality assessment in a brown layer population through family- and population-based software.
Frioni N; Cavero D; Simianer H; Erbe M
BMC Genet; 2019 Jul; 20(1):57. PubMed ID: 31311514
[TBL] [Abstract][Full Text] [Related]
3. Evaluation of consensus strategies for haplotype phasing.
Al Bkhetan Z; Chana G; Ramamohanarao K; Verspoor K; Goudey B
Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33236761
[TBL] [Abstract][Full Text] [Related]
4. Benchmarking phasing software with a whole-genome sequenced cattle pedigree.
Oget-Ebrad C; Kadri NK; Moreira GCM; Karim L; Coppieters W; Georges M; Druet T
BMC Genomics; 2022 Feb; 23(1):130. PubMed ID: 35164677
[TBL] [Abstract][Full Text] [Related]
5. A strategy to improve phasing of whole-genome sequenced individuals through integration of familial information from dense genotype panels.
Faux P; Druet T
Genet Sel Evol; 2017 May; 49(1):46. PubMed ID: 28511677
[TBL] [Abstract][Full Text] [Related]
6. Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets.
Money D; Wilson D; Jenko J; Whalen A; Thorn S; Gorjanc G; Hickey JM
Genet Sel Evol; 2020 Jul; 52(1):38. PubMed ID: 32640985
[TBL] [Abstract][Full Text] [Related]
7. HaploMaker: An improved algorithm for rapid haplotype assembly of genomic sequences.
Fruzangohar M; Timmins WA; Kravchuk O; Taylor J
Gigascience; 2022 May; 11():. PubMed ID: 35579550
[TBL] [Abstract][Full Text] [Related]
8. Efficient algorithms for polyploid haplotype phasing.
He D; Saha S; Finkers R; Parida L
BMC Genomics; 2018 May; 19(Suppl 2):110. PubMed ID: 29764364
[TBL] [Abstract][Full Text] [Related]
9. A comparison of different algorithms for phasing haplotypes using Holstein cattle genotypes and pedigree data.
Miar Y; Sargolzaei M; Schenkel FS
J Dairy Sci; 2017 Apr; 100(4):2837-2849. PubMed ID: 28161175
[TBL] [Abstract][Full Text] [Related]
10. Comparison of phasing strategies for whole human genomes.
Choi Y; Chan AP; Kirkness E; Telenti A; Schork NJ
PLoS Genet; 2018 Apr; 14(4):e1007308. PubMed ID: 29621242
[TBL] [Abstract][Full Text] [Related]
11. Reference-based phasing using the Haplotype Reference Consortium panel.
Loh PR; Danecek P; Palamara PF; Fuchsberger C; A Reshef Y; K Finucane H; Schoenherr S; Forer L; McCarthy S; Abecasis GR; Durbin R; L Price A
Nat Genet; 2016 Nov; 48(11):1443-1448. PubMed ID: 27694958
[TBL] [Abstract][Full Text] [Related]
12. Fast two-stage phasing of large-scale sequence data.
Browning BL; Tian X; Zhou Y; Browning SR
Am J Hum Genet; 2021 Oct; 108(10):1880-1890. PubMed ID: 34478634
[TBL] [Abstract][Full Text] [Related]
13. High rates of phasing errors in highly polymorphic species with low levels of linkage disequilibrium.
Bukowicki M; Franssen SU; Schlötterer C
Mol Ecol Resour; 2016 Jul; 16(4):874-82. PubMed ID: 26929272
[TBL] [Abstract][Full Text] [Related]
14. Strategies for phasing and imputation in a population isolate.
Herzig AF; Nutile T; Babron MC; Ciullo M; Bellenguez C; Leutenegger AL
Genet Epidemiol; 2018 Mar; 42(2):201-213. PubMed ID: 29319195
[TBL] [Abstract][Full Text] [Related]
15. Complete genome phasing of family quartet by combination of genetic, physical and population-based phasing analysis.
Lajugie J; Mukhopadhyay R; Schizas M; Lailler N; Fourel N; Bouhassira EE
PLoS One; 2013; 8(5):e64571. PubMed ID: 23741343
[TBL] [Abstract][Full Text] [Related]
16. Defining haplotype blocks and tag single-nucleotide polymorphisms in the human genome.
Schulze TG; Zhang K; Chen YS; Akula N; Sun F; McMahon FJ
Hum Mol Genet; 2004 Feb; 13(3):335-42. PubMed ID: 14681300
[TBL] [Abstract][Full Text] [Related]
17. trioPhaser: using Mendelian inheritance logic to improve genomic phasing of trios.
Miller DB; Piccolo SR
BMC Bioinformatics; 2021 Nov; 22(1):559. PubMed ID: 34809557
[TBL] [Abstract][Full Text] [Related]
18. WinHAP: an efficient haplotype phasing algorithm based on scalable sliding windows.
Xu Y; Cheng W; Nie P; Zhou F
PLoS One; 2012; 7(8):e43163. PubMed ID: 22905221
[TBL] [Abstract][Full Text] [Related]
19. De novo phasing resolves haplotype sequences in complex plant genomes.
Guk JY; Jang MJ; Choi JW; Lee YM; Kim S
Plant Biotechnol J; 2022 Jun; 20(6):1031-1041. PubMed ID: 35332665
[TBL] [Abstract][Full Text] [Related]
20. Finding haplotype block boundaries by using the minimum-description-length principle.
Anderson EC; Novembre J
Am J Hum Genet; 2003 Aug; 73(2):336-54. PubMed ID: 12858289
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]