814 related articles for article (PubMed ID: 31680682)
1. Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing.
Shahi SK; Zarei K; Guseva NV; Mangalam AK
J Vis Exp; 2019 Oct; (152):. PubMed ID: 31680682
[TBL] [Abstract][Full Text] [Related]
2. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
Schriefer AE; Cliften PF; Hibberd MC; Sawyer C; Brown-Kennerly V; Burcea L; Klotz E; Crosby SD; Gordon JI; Head RD
J Microbiol Methods; 2018 Nov; 154():6-13. PubMed ID: 30273610
[TBL] [Abstract][Full Text] [Related]
3. Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants.
Alcon-Giner C; Caim S; Mitra S; Ketskemety J; Wegmann U; Wain J; Belteki G; Clarke P; Hall LJ
BMC Genomics; 2017 Nov; 18(1):841. PubMed ID: 29096601
[TBL] [Abstract][Full Text] [Related]
4. Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing.
Shin J; Lee S; Go MJ; Lee SY; Kim SC; Lee CH; Cho BK
Sci Rep; 2016 Jul; 6():29681. PubMed ID: 27411898
[TBL] [Abstract][Full Text] [Related]
5. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
[TBL] [Abstract][Full Text] [Related]
6. Guided Protocol for Fecal Microbial Characterization by 16S rRNA-Amplicon Sequencing.
Di Segni A; Braun T; BenShoshan M; Farage Barhom S; Glick Saar E; Cesarkas K; Squires JE; Keller N; Haberman Y
J Vis Exp; 2018 Mar; (133):. PubMed ID: 29608151
[TBL] [Abstract][Full Text] [Related]
7. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
8. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
[TBL] [Abstract][Full Text] [Related]
9. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
Allali I; Arnold JW; Roach J; Cadenas MB; Butz N; Hassan HM; Koci M; Ballou A; Mendoza M; Ali R; Azcarate-Peril MA
BMC Microbiol; 2017 Sep; 17(1):194. PubMed ID: 28903732
[TBL] [Abstract][Full Text] [Related]
10. High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution.
Callahan BJ; Wong J; Heiner C; Oh S; Theriot CM; Gulati AS; McGill SK; Dougherty MK
Nucleic Acids Res; 2019 Oct; 47(18):e103. PubMed ID: 31269198
[TBL] [Abstract][Full Text] [Related]
11. Instruction of microbiome taxonomic profiling based on 16S rRNA sequencing.
Kim H; Kim S; Jung S
J Microbiol; 2020 Mar; 58(3):193-205. PubMed ID: 32108315
[TBL] [Abstract][Full Text] [Related]
12. High-resolution ISR amplicon sequencing reveals personalized oral microbiome.
Mukherjee C; Beall CJ; Griffen AL; Leys EJ
Microbiome; 2018 Sep; 6(1):153. PubMed ID: 30185233
[TBL] [Abstract][Full Text] [Related]
13. Fecal Microbiota Taxonomic Shifts in Chinese Multiple Myeloma Patients Analyzed by Quantitative Polimerase Chain Reaction (QPCR) and 16S rRNA High-Throughput Sequencing.
Zhang B; Gu J; Liu J; Huang B; Li J
Med Sci Monit; 2019 Nov; 25():8269-8280. PubMed ID: 31678982
[TBL] [Abstract][Full Text] [Related]
14. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
Myer PR; Kim M; Freetly HC; Smith TPL
J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
[TBL] [Abstract][Full Text] [Related]
15. Impact of Bead-Beating Intensity on the Genus- and Species-Level Characterization of the Gut Microbiome Using Amplicon and Complete 16S rRNA Gene Sequencing.
Zhang B; Brock M; Arana C; Dende C; van Oers NS; Hooper LV; Raj P
Front Cell Infect Microbiol; 2021; 11():678522. PubMed ID: 34660333
[TBL] [Abstract][Full Text] [Related]
16. Exploring protocol bias in airway microbiome studies: one versus two PCR steps and 16S rRNA gene region V3 V4 versus V4.
Drengenes C; Eagan TML; Haaland I; Wiker HG; Nielsen R
BMC Genomics; 2021 Jan; 22(1):3. PubMed ID: 33397283
[TBL] [Abstract][Full Text] [Related]
17. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.
Ziesemer KA; Mann AE; Sankaranarayanan K; Schroeder H; Ozga AT; Brandt BW; Zaura E; Waters-Rist A; Hoogland M; Salazar-García DC; Aldenderfer M; Speller C; Hendy J; Weston DA; MacDonald SJ; Thomas GH; Collins MJ; Lewis CM; Hofman C; Warinner C
Sci Rep; 2015 Nov; 5():16498. PubMed ID: 26563586
[TBL] [Abstract][Full Text] [Related]
18. Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products.
Xue Z; Kable ME; Marco ML
mSphere; 2018 Oct; 3(5):. PubMed ID: 30333179
[TBL] [Abstract][Full Text] [Related]
19. Fecal metabonomics combined with 16S rRNA gene sequencing to analyze the changes of gut microbiota in rats with kidney-yang deficiency syndrome and the intervention effect of You-gui pill.
Chen R; Wang J; Zhan R; Zhang L; Wang X
J Ethnopharmacol; 2019 Nov; 244():112139. PubMed ID: 31401318
[TBL] [Abstract][Full Text] [Related]
20. Characterization of Fecal Microbiota with Clinical Specimen Using Long-Read and Short-Read Sequencing Platform.
Wei PL; Hung CS; Kao YW; Lin YC; Lee CY; Chang TH; Shia BC; Lin JC
Int J Mol Sci; 2020 Sep; 21(19):. PubMed ID: 32993155
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]