191 related articles for article (PubMed ID: 31722044)
1. Multiplexed Non-barcoded Long-Read Sequencing and Assembling Genomes of Bacillus Strains in Error-Free Simulations.
Qian J; Meng Q; Feng Y; Mao X; Ling Y; Li J
Curr Microbiol; 2020 Jan; 77(1):79-84. PubMed ID: 31722044
[TBL] [Abstract][Full Text] [Related]
2. SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome.
Stadermann KB; Weisshaar B; Holtgräwe D
BMC Bioinformatics; 2015 Sep; 16(1):295. PubMed ID: 26377912
[TBL] [Abstract][Full Text] [Related]
3. Genome Sequencing.
Yoshinaga Y; Daum C; He G; O'Malley R
Methods Mol Biol; 2018; 1775():37-52. PubMed ID: 29876807
[TBL] [Abstract][Full Text] [Related]
4. Clustering of circular consensus sequences: accurate error correction and assembly of single molecule real-time reads from multiplexed amplicon libraries.
Francis F; Dumas MD; Davis SB; Wisser RJ
BMC Bioinformatics; 2018 Aug; 19(1):302. PubMed ID: 30126356
[TBL] [Abstract][Full Text] [Related]
5. Evaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.
Lin HH; Liao YC
PLoS One; 2015; 10(12):e0144305. PubMed ID: 26641475
[TBL] [Abstract][Full Text] [Related]
6. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.
Goldstein S; Beka L; Graf J; Klassen JL
BMC Genomics; 2019 Jan; 20(1):23. PubMed ID: 30626323
[TBL] [Abstract][Full Text] [Related]
7. HISEA: HIerarchical SEed Aligner for PacBio data.
Khiste N; Ilie L
BMC Bioinformatics; 2017 Dec; 18(1):564. PubMed ID: 29258419
[TBL] [Abstract][Full Text] [Related]
8. NPBSS: a new PacBio sequencing simulator for generating the continuous long reads with an empirical model.
Wei ZG; Zhang SW
BMC Bioinformatics; 2018 May; 19(1):177. PubMed ID: 29788930
[TBL] [Abstract][Full Text] [Related]
9. Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case.
Wang W; Schalamun M; Morales-Suarez A; Kainer D; Schwessinger B; Lanfear R
BMC Genomics; 2018 Dec; 19(1):977. PubMed ID: 30594129
[TBL] [Abstract][Full Text] [Related]
10. Genome assembly using Nanopore-guided long and error-free DNA reads.
Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
[TBL] [Abstract][Full Text] [Related]
11. Organelle_PBA, a pipeline for assembling chloroplast and mitochondrial genomes from PacBio DNA sequencing data.
Soorni A; Haak D; Zaitlin D; Bombarely A
BMC Genomics; 2017 Jan; 18(1):49. PubMed ID: 28061749
[TBL] [Abstract][Full Text] [Related]
12. Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome.
Faino L; Seidl MF; Datema E; van den Berg GC; Janssen A; Wittenberg AH; Thomma BP
mBio; 2015 Aug; 6(4):. PubMed ID: 26286689
[TBL] [Abstract][Full Text] [Related]
13. Improving the sensitivity of long read overlap detection using grouped short k-mer matches.
Du N; Chen J; Sun Y
BMC Genomics; 2019 Apr; 20(Suppl 2):190. PubMed ID: 30967123
[TBL] [Abstract][Full Text] [Related]
14. Lost in plasmids: next generation sequencing and the complex genome of the tick-borne pathogen Borrelia burgdorferi.
Margos G; Hepner S; Mang C; Marosevic D; Reynolds SE; Krebs S; Sing A; Derdakova M; Reiter MA; Fingerle V
BMC Genomics; 2017 May; 18(1):422. PubMed ID: 28558786
[TBL] [Abstract][Full Text] [Related]
15. HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads.
Al-Okaily AA
BMC Genomics; 2016 Mar; 17():193. PubMed ID: 26945881
[TBL] [Abstract][Full Text] [Related]
16. Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information.
Chen Z; Pham L; Wu TC; Mo G; Xia Y; Chang PL; Porter D; Phan T; Che H; Tran H; Bansal V; Shaffer J; Belda-Ferre P; Humphrey G; Knight R; Pevzner P; Pham S; Wang Y; Lei M
Genome Res; 2020 Jun; 30(6):898-909. PubMed ID: 32540955
[TBL] [Abstract][Full Text] [Related]
17. Challenges and advances for transcriptome assembly in non-model species.
Ungaro A; Pech N; Martin JF; McCairns RJS; Mévy JP; Chappaz R; Gilles A
PLoS One; 2017; 12(9):e0185020. PubMed ID: 28931057
[TBL] [Abstract][Full Text] [Related]
18. The Long and Short of Genome Sequencing: Using a Hybrid Sequencing Strategy to Sequence Oral Microbial Genomes.
Heng NCK; Stanton JL
Methods Mol Biol; 2023; 2588():75-89. PubMed ID: 36418683
[TBL] [Abstract][Full Text] [Related]
19. Complete genome sequences of pooled genomic DNA from 10 marine bacteria using PacBio long-read sequencing.
Song W; Thomas T; Edwards RJ
Mar Genomics; 2019 Dec; 48():100687. PubMed ID: 31129166
[TBL] [Abstract][Full Text] [Related]
20. Long Range Sequencing and Validation of Insect Genome Assemblies.
Saha S
Methods Mol Biol; 2019; 1858():33-44. PubMed ID: 30414109
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
