258 related articles for article (PubMed ID: 31727847)
1. Deciphering essential cistromes using genome-wide CRISPR screens.
Fei T; Li W; Peng J; Xiao T; Chen CH; Wu A; Huang J; Zang C; Liu XS; Brown M
Proc Natl Acad Sci U S A; 2019 Dec; 116(50):25186-25195. PubMed ID: 31727847
[TBL] [Abstract][Full Text] [Related]
2. Integrated analysis identifies a class of androgen-responsive genes regulated by short combinatorial long-range mechanism facilitated by CTCF.
Taslim C; Chen Z; Huang K; Huang TH; Wang Q; Lin S
Nucleic Acids Res; 2012 Jun; 40(11):4754-64. PubMed ID: 22344698
[TBL] [Abstract][Full Text] [Related]
3. CRISPR/Cas9 offers a new tool for studying the role of chromatin architecture in disease pathogenesis.
Guo X; Dean A
Genome Biol; 2018 Nov; 19(1):185. PubMed ID: 30400943
[TBL] [Abstract][Full Text] [Related]
4. HOX Loci Focused CRISPR/sgRNA Library Screening Identifying Critical CTCF Boundaries.
Luo H; Sobh A; Vulpe CD; Brewer E; Dovat S; Qiu Y; Huang S
J Vis Exp; 2019 Mar; (145):. PubMed ID: 30985763
[TBL] [Abstract][Full Text] [Related]
5. The effect of CTCF binding sites destruction by CRISPR/Cas9 on transcription of metallothionein gene family in liver hepatocellular carcinoma.
Gong W; Liu Y; Qu H; Liu A; Sun P; Wang X
Biochem Biophys Res Commun; 2019 Mar; 510(4):530-538. PubMed ID: 30738580
[TBL] [Abstract][Full Text] [Related]
6. Multiple CTCF sites cooperate with each other to maintain a TAD for enhancer-promoter interaction in the β-globin locus.
Kang J; Kim YW; Park S; Kang Y; Kim A
FASEB J; 2021 Aug; 35(8):e21768. PubMed ID: 34245617
[TBL] [Abstract][Full Text] [Related]
7. CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops.
Guo Y; Perez AA; Hazelett DJ; Coetzee GA; Rhie SK; Farnham PJ
Genome Biol; 2018 Oct; 19(1):160. PubMed ID: 30296942
[TBL] [Abstract][Full Text] [Related]
8. Dynamic CTCF binding directly mediates interactions among cis-regulatory elements essential for hematopoiesis.
Qi Q; Cheng L; Tang X; He Y; Li Y; Yee T; Shrestha D; Feng R; Xu P; Zhou X; Pruett-Miller S; Hardison RC; Weiss MJ; Cheng Y
Blood; 2021 Mar; 137(10):1327-1339. PubMed ID: 33512425
[TBL] [Abstract][Full Text] [Related]
9. CRISPRi screens reveal a DNA methylation-mediated 3D genome dependent causal mechanism in prostate cancer.
Ahmed M; Soares F; Xia JH; Yang Y; Li J; Guo H; Su P; Tian Y; Lee HJ; Wang M; Akhtar N; Houlahan KE; Bosch A; Zhou S; Mazrooei P; Hua JT; Chen S; Petricca J; Zeng Y; Davies A; Fraser M; Quigley DA; Feng FY; Boutros PC; Lupien M; Zoubeidi A; Wang L; Walsh MJ; Wang T; Ren S; Wei GH; He HH
Nat Commun; 2021 Mar; 12(1):1781. PubMed ID: 33741908
[TBL] [Abstract][Full Text] [Related]
10. A CRISPR-Cas9 screen identifies essential CTCF anchor sites for estrogen receptor-driven breast cancer cell proliferation.
Korkmaz G; Manber Z; Lopes R; Prekovic S; Schuurman K; Kim Y; Teunissen H; Flach K; Wit E; Galli GG; Zwart W; Elkon R; Agami R
Nucleic Acids Res; 2019 Oct; 47(18):9557-9572. PubMed ID: 31372638
[TBL] [Abstract][Full Text] [Related]
11. SNAIL1-mediated downregulation of FOXA proteins facilitates the inactivation of transcriptional enhancer elements at key epithelial genes in colorectal cancer cells.
Jägle S; Busch H; Freihen V; Beyes S; Schrempp M; Boerries M; Hecht A
PLoS Genet; 2017 Nov; 13(11):e1007109. PubMed ID: 29155818
[TBL] [Abstract][Full Text] [Related]
12. Identifying clusters of
Madani Tonekaboni SA; Mazrooei P; Kofia V; Haibe-Kains B; Lupien M
Genome Res; 2019 Oct; 29(10):1733-1743. PubMed ID: 31533978
[TBL] [Abstract][Full Text] [Related]
13. FOXA1 knock-out via CRISPR/Cas9 altered Casp-9, Bax, CCND1, CDK4, and fibronectin expressions in LNCaP cells.
Albayrak G; Konac E; Ugras Dikmen A; Bilen CY
Exp Biol Med (Maywood); 2018 Aug; 243(12):990-994. PubMed ID: 30043639
[TBL] [Abstract][Full Text] [Related]
14. Identification of functional regulatory elements in the human genome using pooled CRISPR screens.
Borys SM; Younger ST
BMC Genomics; 2020 Jan; 21(1):107. PubMed ID: 32005150
[TBL] [Abstract][Full Text] [Related]
15. Associations of CTCF and FOXA1 with androgen and IGF pathways in men with localized prostate cancer.
Barker R; Biernacka K; Kingshott G; Sewell A; Gwiti P; Martin RM; Lane JA; McGeagh L; Koupparis A; Rowe E; Oxley J; Perks CM; Holly JMP
Growth Horm IGF Res; 2023; 69-70():101533. PubMed ID: 37086646
[TBL] [Abstract][Full Text] [Related]
16. CTCF Expression is Essential for Somatic Cell Viability and Protection Against Cancer.
Bailey CG; Metierre C; Feng Y; Baidya K; Filippova GN; Loukinov DI; Lobanenkov VV; Semaan C; Rasko JE
Int J Mol Sci; 2018 Nov; 19(12):. PubMed ID: 30513694
[TBL] [Abstract][Full Text] [Related]
17. Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
Khoury A; Achinger-Kawecka J; Bert SA; Smith GC; French HJ; Luu PL; Peters TJ; Du Q; Parry AJ; Valdes-Mora F; Taberlay PC; Stirzaker C; Statham AL; Clark SJ
Nat Commun; 2020 Jan; 11(1):54. PubMed ID: 31911579
[TBL] [Abstract][Full Text] [Related]
18. Acute depletion of CTCF rewires genome-wide chromatin accessibility.
Xu B; Wang H; Wright S; Hyle J; Zhang Y; Shao Y; Niu M; Fan Y; Rosikiewicz W; Djekidel MN; Peng J; Lu R; Li C
Genome Biol; 2021 Aug; 22(1):244. PubMed ID: 34429148
[TBL] [Abstract][Full Text] [Related]
19. CRISPR-based knock-in mutagenesis of the pioneer transcription factor FOXA1: optimization of strategies for multi-allelic proteins in cancer cells.
Li S; Garay JP; Tubbs CA; Franco HL
FEBS Open Bio; 2021 Jun; 11(6):1537-1551. PubMed ID: 33666335
[TBL] [Abstract][Full Text] [Related]
20. FOXA1 acts upstream of GATA2 and AR in hormonal regulation of gene expression.
Zhao JC; Fong KW; Jin HJ; Yang YA; Kim J; Yu J
Oncogene; 2016 Aug; 35(33):4335-44. PubMed ID: 26751772
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]