These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

122 related articles for article (PubMed ID: 31765317)

  • 1. Alignment-Free Sequence Comparison With Multiple k Values.
    Qian Y; Zhang Y; Zhang J
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(5):1841-1849. PubMed ID: 31765317
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Alignment-free sequence comparison (II): theoretical power of comparison statistics.
    Wan L; Reinert G; Sun F; Waterman MS
    J Comput Biol; 2010 Nov; 17(11):1467-90. PubMed ID: 20973742
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Alignment of biological sequences with quality scores.
    Na JC; Roh K; Apostolico A; Park K
    Int J Bioinform Res Appl; 2009; 5(1):97-113. PubMed ID: 19136367
    [TBL] [Abstract][Full Text] [Related]  

  • 4. KMC 2: fast and resource-frugal k-mer counting.
    Deorowicz S; Kokot M; Grabowski S; Debudaj-Grabysz A
    Bioinformatics; 2015 May; 31(10):1569-76. PubMed ID: 25609798
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Using Gaussian model to improve biological sequence comparison.
    Dai Q; Liu X; Li L; Yao Y; Han B; Zhu L
    J Comput Chem; 2010 Jan; 31(2):351-61. PubMed ID: 19479732
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CSA: an efficient algorithm to improve circular DNA multiple alignment.
    Fernandes F; Pereira L; Freitas AT
    BMC Bioinformatics; 2009 Jul; 10():230. PubMed ID: 19627599
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A measure of DNA sequence dissimilarity based on free energy of nearest-neighbor interaction.
    Zhang Y; Chen W
    J Biomol Struct Dyn; 2011 Feb; 28(4):557-65. PubMed ID: 21142215
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Reducing Alignment Time Complexity of Ultra-Large Sets of Sequences.
    Rubio-Largo Á; Vanneschi L; Castelli M; Vega-Rodríguez MA
    J Comput Biol; 2017 Nov; 24(11):1144-1154. PubMed ID: 28686466
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A survey and evaluations of histogram-based statistics in alignment-free sequence comparison.
    Luczak BB; James BT; Girgis HZ
    Brief Bioinform; 2019 Jul; 20(4):1222-1237. PubMed ID: 29220512
    [TBL] [Abstract][Full Text] [Related]  

  • 10. FramePlus: aligning DNA to protein sequences.
    Halperin E; Faigler S; Gill-More R
    Bioinformatics; 1999 Nov; 15(11):867-73. PubMed ID: 10743553
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Vertical decomposition with Genetic Algorithm for Multiple Sequence Alignment.
    Naznin F; Sarker R; Essam D
    BMC Bioinformatics; 2011 Aug; 12():353. PubMed ID: 21867510
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Centroid based clustering of high throughput sequencing reads based on n-mer counts.
    Solovyov A; Lipkin WI
    BMC Bioinformatics; 2013 Sep; 14():268. PubMed ID: 24011402
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An improved alignment-free model for DNA sequence similarity metric.
    Bao J; Yuan R; Bao Z
    BMC Bioinformatics; 2014 Sep; 15(1):321. PubMed ID: 25261973
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A novel statistical measure for sequence comparison on the basis of k-word counts.
    Yang X; Wang T
    J Theor Biol; 2013 Feb; 318():91-100. PubMed ID: 23147229
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A probabilistic measure for alignment-free sequence comparison.
    Pham TD; Zuegg J
    Bioinformatics; 2004 Dec; 20(18):3455-61. PubMed ID: 15271780
    [TBL] [Abstract][Full Text] [Related]  

  • 16. MISHIMA--a new method for high speed multiple alignment of nucleotide sequences of bacterial genome scale data.
    Kryukov K; Saitou N
    BMC Bioinformatics; 2010 Mar; 11():142. PubMed ID: 20298584
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences.
    Forêt S; Kantorovitz MR; Burden CJ
    BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S21. PubMed ID: 17254306
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Multiple alignment of DNA sequences with MAFFT.
    Katoh K; Asimenos G; Toh H
    Methods Mol Biol; 2009; 537():39-64. PubMed ID: 19378139
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Novel hybrid genetic algorithm for progressive multiple sequence alignment.
    Afridi MI
    Int J Bioinform Res Appl; 2013; 9(6):614-24. PubMed ID: 24084242
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Revisiting Evaluation of Multiple Sequence Alignment Methods.
    Warnow T
    Methods Mol Biol; 2021; 2231():299-317. PubMed ID: 33289899
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.