142 related articles for article (PubMed ID: 31775624)
1. Enhancement of de novo sequencing, assembly and annotation of the Mongolian gerbil genome with transcriptome sequencing and assembly from several different tissues.
Cheng S; Fu Y; Zhang Y; Xian W; Wang H; Grothe B; Liu X; Xu X; Klug A; McCullagh EA
BMC Genomics; 2019 Nov; 20(1):903. PubMed ID: 31775624
[TBL] [Abstract][Full Text] [Related]
2. De novo sequencing and initial annotation of the Mongolian gerbil (Meriones unguiculatus) genome.
Zorio DAR; Monsma S; Sanes DH; Golding NL; Rubel EW; Wang Y
Genomics; 2019 May; 111(3):441-449. PubMed ID: 29526484
[TBL] [Abstract][Full Text] [Related]
3. Improved annotation with de novo transcriptome assembly in four social amoeba species.
Singh R; Lawal HM; Schilde C; Glöckner G; Barton GJ; Schaap P; Cole C
BMC Genomics; 2017 Jan; 18(1):120. PubMed ID: 28143409
[TBL] [Abstract][Full Text] [Related]
4. A comparative analysis of methods for de novo assembly of hymenopteran genomes using either haploid or diploid samples.
Yahav T; Privman E
Sci Rep; 2019 Apr; 9(1):6480. PubMed ID: 31019201
[TBL] [Abstract][Full Text] [Related]
5. Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50).
Williams JL; Iamartino D; Pruitt KD; Sonstegard T; Smith TPL; Low WY; Biagini T; Bomba L; Capomaccio S; Castiglioni B; Coletta A; Corrado F; Ferré F; Iannuzzi L; Lawley C; Macciotta N; McClure M; Mancini G; Matassino D; Mazza R; Milanesi M; Moioli B; Morandi N; Ramunno L; Peretti V; Pilla F; Ramelli P; Schroeder S; Strozzi F; Thibaud-Nissen F; Zicarelli L; Ajmone-Marsan P; Valentini A; Chillemi G; Zimin A
Gigascience; 2017 Oct; 6(10):1-6. PubMed ID: 29048578
[TBL] [Abstract][Full Text] [Related]
6. Optimization of de novo transcriptome assembly from high-throughput short read sequencing data improves functional annotation for non-model organisms.
Haznedaroglu BZ; Reeves D; Rismani-Yazdi H; Peccia J
BMC Bioinformatics; 2012 Jul; 13():170. PubMed ID: 22808927
[TBL] [Abstract][Full Text] [Related]
7. High-throughput sequencing and de novo assembly of Brassica oleracea var. Capitata L. for transcriptome analysis.
Kim HA; Lim CJ; Kim S; Choe JK; Jo SH; Baek N; Kwon SY
PLoS One; 2014; 9(3):e92087. PubMed ID: 24682075
[TBL] [Abstract][Full Text] [Related]
8. The complete mitochondrial genome of the Mongolian gerbil, Meriones unguiculatus (Rodentia: Muridae: Gerbillinae).
Kim EB; Lee SG
Mitochondrial DNA A DNA Mapp Seq Anal; 2016; 27(2):1457-8. PubMed ID: 25185794
[TBL] [Abstract][Full Text] [Related]
9. De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read.
Austin CM; Tan MH; Harrisson KA; Lee YP; Croft LJ; Sunnucks P; Pavlova A; Gan HM
Gigascience; 2017 Aug; 6(8):1-6. PubMed ID: 28873963
[TBL] [Abstract][Full Text] [Related]
10.
Lok S; Paton TA; Wang Z; Kaur G; Walker S; Yuen RK; Sung WW; Whitney J; Buchanan JA; Trost B; Singh N; Apresto B; Chen N; Coole M; Dawson TJ; Ho K; Hu Z; Pullenayegum S; Samler K; Shipstone A; Tsoi F; Wang T; Pereira SL; Rostami P; Ryan CA; Tong AH; Ng K; Sundaravadanam Y; Simpson JT; Lim BK; Engstrom MD; Dutton CJ; Kerr KC; Franke M; Rapley W; Wintle RF; Scherer SW
G3 (Bethesda); 2017 Feb; 7(2):755-773. PubMed ID: 28087693
[TBL] [Abstract][Full Text] [Related]
11. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
12. Challenges and advances for transcriptome assembly in non-model species.
Ungaro A; Pech N; Martin JF; McCairns RJS; Mévy JP; Chappaz R; Gilles A
PLoS One; 2017; 12(9):e0185020. PubMed ID: 28931057
[TBL] [Abstract][Full Text] [Related]
13. Genome and transcriptome assemblies of the kuruma shrimp, Marsupenaeus japonicus.
Kawato S; Nishitsuji K; Arimoto A; Hisata K; Kawamitsu M; Nozaki R; Kondo H; Shinzato C; Ohira T; Satoh N; Shoguchi E; Hirono I
G3 (Bethesda); 2021 Oct; 11(11):. PubMed ID: 34515781
[TBL] [Abstract][Full Text] [Related]
14. An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi).
Farré M; Li Q; Darolti I; Zhou Y; Damas J; Proskuryakova AA; Kulemzina AI; Chemnick LG; Kim J; Ryder OA; Ma J; Graphodatsky AS; Zhang G; Larkin DM; Lewin HA
Gigascience; 2019 Aug; 8(8):. PubMed ID: 31367745
[TBL] [Abstract][Full Text] [Related]
15. A reference gene set construction using RNA-seq of multiple tissues of Chinese giant salamander, Andrias davidianus.
Geng X; Li W; Shang H; Gou Q; Zhang F; Zang X; Zeng B; Li J; Wang Y; Ma J; Guo J; Jian J; Chen B; Qiao Z; Zhou M; Wei H; Fang X; Xu C
Gigascience; 2017 Mar; 6(3):1-7. PubMed ID: 28204480
[TBL] [Abstract][Full Text] [Related]
16. A pipeline for the de novo assembly of the Themira biloba (Sepsidae: Diptera) transcriptome using a multiple k-mer length approach.
Melicher D; Torson AS; Dworkin I; Bowsher JH
BMC Genomics; 2014 Mar; 15(1):188. PubMed ID: 24621177
[TBL] [Abstract][Full Text] [Related]
17.
Lantican DV; Strickler SR; Canama AO; Gardoce RR; Mueller LA; Galvez HF
G3 (Bethesda); 2019 Aug; 9(8):2377-2393. PubMed ID: 31167834
[TBL] [Abstract][Full Text] [Related]
18. De novo assembly and characterization of the liver transcriptome of Mugil incilis (lisa) using next generation sequencing.
Bertel-Sevilla A; Alzate JF; Olivero-Verbel J
Sci Rep; 2020 Aug; 10(1):13957. PubMed ID: 32811897
[TBL] [Abstract][Full Text] [Related]
19. Comparative performance of transcriptome assembly methods for non-model organisms.
Huang X; Chen XG; Armbruster PA
BMC Genomics; 2016 Jul; 17():523. PubMed ID: 27464550
[TBL] [Abstract][Full Text] [Related]
20. Phylogenetic analysis of the Mongolian gerbil (Meriones unguiculatus) from China based on mitochondrial genome.
Li CL; Du XY; Gao J; Wang C; Guo HG; Dai FW; Sa XY; An W; Chen ZW
Genet Mol Res; 2016 Sep; 15(3):. PubMed ID: 27706720
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
