326 related articles for article (PubMed ID: 31801998)
1. Key role for CTCF in establishing chromatin structure in human embryos.
Chen X; Ke Y; Wu K; Zhao H; Sun Y; Gao L; Liu Z; Zhang J; Tao W; Hou Z; Liu H; Liu J; Chen ZJ
Nature; 2019 Dec; 576(7786):306-310. PubMed ID: 31801998
[TBL] [Abstract][Full Text] [Related]
2. Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains.
Kentepozidou E; Aitken SJ; Feig C; Stefflova K; Ibarra-Soria X; Odom DT; Roller M; Flicek P
Genome Biol; 2020 Jan; 21(1):5. PubMed ID: 31910870
[TBL] [Abstract][Full Text] [Related]
3. The asynchronous establishment of chromatin 3D architecture between in vitro fertilized and uniparental preimplantation pig embryos.
Li F; Wang D; Song R; Cao C; Zhang Z; Wang Y; Li X; Huang J; Liu Q; Hou N; Xu B; Li X; Gao X; Jia Y; Zhao J; Wang Y
Genome Biol; 2020 Aug; 21(1):203. PubMed ID: 32778155
[TBL] [Abstract][Full Text] [Related]
4. CTCF, BEAF-32, and CP190 are not required for the establishment of TADs in early
Cavalheiro GR; Girardot C; Viales RR; Pollex T; Cao TBN; Lacour P; Feng S; Rabinowitz A; Furlong EEM
Sci Adv; 2023 Feb; 9(5):eade1085. PubMed ID: 36735786
[TBL] [Abstract][Full Text] [Related]
5. CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells.
Han S; Lee H; Lee AJ; Kim SK; Jung I; Koh GY; Kim TK; Lee D
Mol Cells; 2021 Nov; 44(11):805-829. PubMed ID: 34764232
[TBL] [Abstract][Full Text] [Related]
6. Establishment of 3D chromatin structure after fertilization and the metabolic switch at the morula-to-blastocyst transition require CTCF.
Andreu MJ; Alvarez-Franco A; Portela M; Gimenez-Llorente D; Cuadrado A; Badia-Careaga C; Tiana M; Losada A; Manzanares M
Cell Rep; 2022 Oct; 41(3):111501. PubMed ID: 36260992
[TBL] [Abstract][Full Text] [Related]
7. Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
Khoury A; Achinger-Kawecka J; Bert SA; Smith GC; French HJ; Luu PL; Peters TJ; Du Q; Parry AJ; Valdes-Mora F; Taberlay PC; Stirzaker C; Statham AL; Clark SJ
Nat Commun; 2020 Jan; 11(1):54. PubMed ID: 31911579
[TBL] [Abstract][Full Text] [Related]
8. CTCF sites display cell cycle-dependent dynamics in factor binding and nucleosome positioning.
Oomen ME; Hansen AS; Liu Y; Darzacq X; Dekker J
Genome Res; 2019 Feb; 29(2):236-249. PubMed ID: 30655336
[TBL] [Abstract][Full Text] [Related]
9. Making sense of the linear genome, gene function and TADs.
Long HS; Greenaway S; Powell G; Mallon AM; Lindgren CM; Simon MM
Epigenetics Chromatin; 2022 Jan; 15(1):4. PubMed ID: 35090532
[TBL] [Abstract][Full Text] [Related]
10. Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF.
Hansen AS; Hsieh TS; Cattoglio C; Pustova I; Saldaña-Meyer R; Reinberg D; Darzacq X; Tjian R
Mol Cell; 2019 Nov; 76(3):395-411.e13. PubMed ID: 31522987
[TBL] [Abstract][Full Text] [Related]
11. 3D Chromatin Structures of Mature Gametes and Structural Reprogramming during Mammalian Embryogenesis.
Ke Y; Xu Y; Chen X; Feng S; Liu Z; Sun Y; Yao X; Li F; Zhu W; Gao L; Chen H; Du Z; Xie W; Xu X; Huang X; Liu J
Cell; 2017 Jul; 170(2):367-381.e20. PubMed ID: 28709003
[TBL] [Abstract][Full Text] [Related]
12. Spatial patterns of CTCF sites define the anatomy of TADs and their boundaries.
Nanni L; Ceri S; Logie C
Genome Biol; 2020 Aug; 21(1):197. PubMed ID: 32782014
[TBL] [Abstract][Full Text] [Related]
13. The Insulator Protein CTCF Is Required for Correct
Gambetta MC; Furlong EEM
Genetics; 2018 Sep; 210(1):129-136. PubMed ID: 30021792
[TBL] [Abstract][Full Text] [Related]
14. HOX Loci Focused CRISPR/sgRNA Library Screening Identifying Critical CTCF Boundaries.
Luo H; Sobh A; Vulpe CD; Brewer E; Dovat S; Qiu Y; Huang S
J Vis Exp; 2019 Mar; (145):. PubMed ID: 30985763
[TBL] [Abstract][Full Text] [Related]
15. Multiple CTCF sites cooperate with each other to maintain a TAD for enhancer-promoter interaction in the β-globin locus.
Kang J; Kim YW; Park S; Kang Y; Kim A
FASEB J; 2021 Aug; 35(8):e21768. PubMed ID: 34245617
[TBL] [Abstract][Full Text] [Related]
16. Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.
Nora EP; Goloborodko A; Valton AL; Gibcus JH; Uebersohn A; Abdennur N; Dekker J; Mirny LA; Bruneau BG
Cell; 2017 May; 169(5):930-944.e22. PubMed ID: 28525758
[TBL] [Abstract][Full Text] [Related]
17. Quantitative differences in TAD border strength underly the TAD hierarchy in Drosophila chromosomes.
Luzhin AV; Flyamer IM; Khrameeva EE; Ulianov SV; Razin SV; Gavrilov AA
J Cell Biochem; 2019 Mar; 120(3):4494-4503. PubMed ID: 30260021
[TBL] [Abstract][Full Text] [Related]
18. A tour of 3D genome with a focus on CTCF.
Wang DC; Wang W; Zhang L; Wang X
Semin Cell Dev Biol; 2019 Jun; 90():4-11. PubMed ID: 30031214
[TBL] [Abstract][Full Text] [Related]
19. Inversion of a topological domain leads to restricted changes in its gene expression and affects interdomain communication.
Galupa R; Picard C; Servant N; Nora EP; Zhan Y; van Bemmel JG; El Marjou F; Johanneau C; Borensztein M; Ancelin K; Giorgetti L; Heard E
Development; 2022 May; 149(9):. PubMed ID: 35502750
[TBL] [Abstract][Full Text] [Related]
20. Maintenance of CTCF- and Transcription Factor-Mediated Interactions from the Gametes to the Early Mouse Embryo.
Jung YH; Kremsky I; Gold HB; Rowley MJ; Punyawai K; Buonanotte A; Lyu X; Bixler BJ; Chan AWS; Corces VG
Mol Cell; 2019 Jul; 75(1):154-171.e5. PubMed ID: 31056445
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]