These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

132 related articles for article (PubMed ID: 31808764)

  • 1. A lattice kinetic Monte-Carlo method for simulating chromosomal dynamics and other (non-)equilibrium bio-assemblies.
    Miermans CA; Broedersz CP
    Soft Matter; 2020 Jan; 16(2):544-556. PubMed ID: 31808764
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Coarse-grained lattice Monte Carlo simulations with continuous interaction potentials.
    Liu X; Seider WD; Sinno T
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Aug; 86(2 Pt 2):026708. PubMed ID: 23005883
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Coarse-grained Monte Carlo simulations of non-equilibrium systems.
    Liu X; Crocker JC; Sinno T
    J Chem Phys; 2013 Jun; 138(24):244111. PubMed ID: 23822231
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Analysis of the lattice kinetic Monte Carlo method in systems with external fields.
    Lee YK; Sinno T
    J Chem Phys; 2016 Dec; 145(23):234104. PubMed ID: 28010081
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Coarse-grained lattice kinetic Monte Carlo simulation of systems of strongly interacting particles.
    Dai J; Seider WD; Sinno T
    J Chem Phys; 2008 May; 128(19):194705. PubMed ID: 18500884
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A Monte Carlo Metropolis-Hastings algorithm for sampling from distributions with intractable normalizing constants.
    Liang F; Jin IH
    Neural Comput; 2013 Aug; 25(8):2199-234. PubMed ID: 23607562
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Coarse-grained stochastic processes for microscopic lattice systems.
    Katsoulakis MA; Majda AJ; Vlachos DG
    Proc Natl Acad Sci U S A; 2003 Feb; 100(3):782-7. PubMed ID: 12552105
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels.
    Im W; Seefeld S; Roux B
    Biophys J; 2000 Aug; 79(2):788-801. PubMed ID: 10920012
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Wavelet Monte Carlo dynamics: A new algorithm for simulating the hydrodynamics of interacting Brownian particles.
    Dyer OT; Ball RC
    J Chem Phys; 2017 Mar; 146(12):124111. PubMed ID: 28388112
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A general method for spatially coarse-graining Metropolis Monte Carlo simulations onto a lattice.
    Liu X; Seider WD; Sinno T
    J Chem Phys; 2013 Mar; 138(11):114104. PubMed ID: 23534624
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Efficient hybrid non-equilibrium molecular dynamics--Monte Carlo simulations with symmetric momentum reversal.
    Chen Y; Roux B
    J Chem Phys; 2014 Sep; 141(11):114107. PubMed ID: 25240345
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Monte Carlo algorithm to study polymer translocation through nanopores. I. Theory and numerical approach.
    Gauthier MG; Slater GW
    J Chem Phys; 2008 Feb; 128(6):065103. PubMed ID: 18282074
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Path ensembles and path sampling in nonequilibrium stochastic systems.
    Harland B; Sun SX
    J Chem Phys; 2007 Sep; 127(10):104103. PubMed ID: 17867733
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RNA folding kinetics using Monte Carlo and Gillespie algorithms.
    Clote P; Bayegan AH
    J Math Biol; 2018 Apr; 76(5):1195-1227. PubMed ID: 28780735
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Monte Carlo simulation of dense polymer melts using event chain algorithms.
    Kampmann TA; Boltz HH; Kierfeld J
    J Chem Phys; 2015 Jul; 143(4):044105. PubMed ID: 26233105
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Lattice kinetic Monte Carlo simulations of convective-diffusive systems.
    Flamm MH; Diamond SL; Sinno T
    J Chem Phys; 2009 Mar; 130(9):094904. PubMed ID: 19275421
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Transition network based on equilibrium sampling: a new method for extracting kinetic information from Monte Carlo simulations of protein folding.
    Klenin KV; Wenzel W
    J Chem Phys; 2011 Dec; 135(23):235105. PubMed ID: 22191905
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Biomolecule-directed assembly of nanoscale building blocks studied via lattice Monte Carlo simulation.
    Chen T; Lamm MH; Glotzer SC
    J Chem Phys; 2004 Aug; 121(8):3919-29. PubMed ID: 15303961
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Monte Carlo and event-driven dynamics of Brownian particles with orientational degrees of freedom.
    Romano F; De Michele C; Marenduzzo D; Sanz E
    J Chem Phys; 2011 Sep; 135(12):124106. PubMed ID: 21974511
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Enhanced Sampling of an Atomic Model with Hybrid Nonequilibrium Molecular Dynamics-Monte Carlo Simulations Guided by a Coarse-Grained Model.
    Chen Y; Roux B
    J Chem Theory Comput; 2015 Aug; 11(8):3572-83. PubMed ID: 26574442
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.