These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
114 related articles for article (PubMed ID: 31830243)
41. Genozip: a universal extensible genomic data compressor. Lan D; Tobler R; Souilmi Y; Llamas B Bioinformatics; 2021 Aug; 37(16):2225-2230. PubMed ID: 33585897 [TBL] [Abstract][Full Text] [Related]
42. PyRanges: efficient comparison of genomic intervals in Python. Stovner EB; Sætrom P Bioinformatics; 2020 Feb; 36(3):918-919. PubMed ID: 31373614 [TBL] [Abstract][Full Text] [Related]
43. QVZ: lossy compression of quality values. Malysa G; Hernaez M; Ochoa I; Rao M; Ganesan K; Weissman T Bioinformatics; 2015 Oct; 31(19):3122-9. PubMed ID: 26026138 [TBL] [Abstract][Full Text] [Related]
44. Nucleotide Archival Format (NAF) enables efficient lossless reference-free compression of DNA sequences. Kryukov K; Ueda MT; Nakagawa S; Imanishi T Bioinformatics; 2019 Oct; 35(19):3826-3828. PubMed ID: 30799504 [TBL] [Abstract][Full Text] [Related]
45. NanoPack: visualizing and processing long-read sequencing data. De Coster W; D'Hert S; Schultz DT; Cruts M; Van Broeckhoven C Bioinformatics; 2018 Aug; 34(15):2666-2669. PubMed ID: 29547981 [TBL] [Abstract][Full Text] [Related]
46. Integrating long-range connectivity information into de Bruijn graphs. Turner I; Garimella KV; Iqbal Z; McVean G Bioinformatics; 2018 Aug; 34(15):2556-2565. PubMed ID: 29554215 [TBL] [Abstract][Full Text] [Related]
47. htsint: a Python library for sequencing pipelines that combines data through gene set generation. Richards AJ; Herrel A; Bonneaud C BMC Bioinformatics; 2015 Sep; 16():307. PubMed ID: 26399714 [TBL] [Abstract][Full Text] [Related]
48. Cram-JS: reference-based decompression in node and the browser. Buels R; Dider S; Diesh C; Robinson J; Holmes I Bioinformatics; 2019 Nov; 35(21):4451-4452. PubMed ID: 31099383 [TBL] [Abstract][Full Text] [Related]
49. Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences. Zhang J; Kudrna D; Mu T; Li W; Copetti D; Yu Y; Goicoechea JL; Lei Y; Wing RA Bioinformatics; 2016 Oct; 32(20):3058-3064. PubMed ID: 27318200 [TBL] [Abstract][Full Text] [Related]
50. Transformations for the compression of FASTQ quality scores of next-generation sequencing data. Wan R; Anh VN; Asai K Bioinformatics; 2012 Mar; 28(5):628-35. PubMed ID: 22171329 [TBL] [Abstract][Full Text] [Related]
51. capC-MAP: software for analysis of Capture-C data. Buckle A; Gilbert N; Marenduzzo D; Brackley CA Bioinformatics; 2019 Nov; 35(22):4773-4775. PubMed ID: 31173058 [TBL] [Abstract][Full Text] [Related]
52. w4CSeq: software and web application to analyze 4C-seq data. Cai M; Gao F; Lu W; Wang K Bioinformatics; 2016 Nov; 32(21):3333-3335. PubMed ID: 27378289 [TBL] [Abstract][Full Text] [Related]
53. Predicting the optimal growth temperatures of prokaryotes using only genome derived features. Sauer DB; Wang DN Bioinformatics; 2019 Sep; 35(18):3224-3231. PubMed ID: 30689741 [TBL] [Abstract][Full Text] [Related]