These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

147 related articles for article (PubMed ID: 31869798)

  • 1. Lossy Compression of Quality Values in Sequencing Data.
    Morales VS; Houghten S
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(5):1958-1969. PubMed ID: 31869798
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CALQ: compression of quality values of aligned sequencing data.
    Voges J; Ostermann J; Hernaez M
    Bioinformatics; 2018 May; 34(10):1650-1658. PubMed ID: 29186284
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Performance evaluation of lossy quality compression algorithms for RNA-seq data.
    Yu R; Yang W; Wang S
    BMC Bioinformatics; 2020 Jul; 21(1):321. PubMed ID: 32689929
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Compressing genomic sequence fragments using SlimGene.
    Kozanitis C; Saunders C; Kruglyak S; Bafna V; Varghese G
    J Comput Biol; 2011 Mar; 18(3):401-13. PubMed ID: 21385043
    [TBL] [Abstract][Full Text] [Related]  

  • 5. QualComp: a new lossy compressor for quality scores based on rate distortion theory.
    Ochoa I; Asnani H; Bharadia D; Chowdhury M; Weissman T; Yona G
    BMC Bioinformatics; 2013 Jun; 14():187. PubMed ID: 23758828
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Effect of lossy compression of quality scores on variant calling.
    Ochoa I; Hernaez M; Goldfeder R; Weissman T; Ashley E
    Brief Bioinform; 2017 Mar; 18(2):183-194. PubMed ID: 26966283
    [TBL] [Abstract][Full Text] [Related]  

  • 7. FaStore: a space-saving solution for raw sequencing data.
    Roguski L; Ochoa I; Hernaez M; Deorowicz S
    Bioinformatics; 2018 Aug; 34(16):2748-2756. PubMed ID: 29617939
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A Two-Level Scheme for Quality Score Compression.
    Voges J; Fotouhi A; Ostermann J; Külekci MO
    J Comput Biol; 2018 Oct; 25(10):1141-1151. PubMed ID: 30059248
    [TBL] [Abstract][Full Text] [Related]  

  • 9. QVZ: lossy compression of quality values.
    Malysa G; Hernaez M; Ochoa I; Rao M; Ganesan K; Weissman T
    Bioinformatics; 2015 Oct; 31(19):3122-9. PubMed ID: 26026138
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Lossy compression of quality scores in genomic data.
    Cánovas R; Moffat A; Turpin A
    Bioinformatics; 2014 Aug; 30(15):2130-6. PubMed ID: 24728856
    [TBL] [Abstract][Full Text] [Related]  

  • 11. NGC: lossless and lossy compression of aligned high-throughput sequencing data.
    Popitsch N; von Haeseler A
    Nucleic Acids Res; 2013 Jan; 41(1):e27. PubMed ID: 23066097
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Crumble: reference free lossy compression of sequence quality values.
    Bonfield JK; McCarthy SA; Durbin R
    Bioinformatics; 2019 Jan; 35(2):337-339. PubMed ID: 29992288
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CROMqs: An infinitesimal successive refinement lossy compressor for the quality scores.
    No A; Hernaez M; Ochoa I
    J Bioinform Comput Biol; 2020 Dec; 18(6):2050031. PubMed ID: 32938284
    [TBL] [Abstract][Full Text] [Related]  

  • 14. mspack: efficient lossless and lossy mass spectrometry data compression.
    Hanau F; Röst H; Ochoa I
    Bioinformatics; 2021 Nov; 37(21):3923-3925. PubMed ID: 34478503
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MetaCRAM: an integrated pipeline for metagenomic taxonomy identification and compression.
    Kim M; Zhang X; Ligo JG; Farnoud F; Veeravalli VV; Milenkovic O
    BMC Bioinformatics; 2016 Feb; 17():94. PubMed ID: 26895947
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Indexing
    Shibuya Y; Comin M
    J Bioinform Comput Biol; 2019 Oct; 17(5):1940011. PubMed ID: 31856669
    [TBL] [Abstract][Full Text] [Related]  

  • 17. KungFQ: a simple and powerful approach to compress fastq files.
    Grassi E; Di Gregorio F; Molineris I
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1837-42. PubMed ID: 23221092
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ScaleQC: a scalable lossy to lossless solution for NGS data compression.
    Yu R; Yang W
    Bioinformatics; 2020 Nov; 36(17):4551-4559. PubMed ID: 32458976
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The MetaGens algorithm for metagenomic database lossy compression and subject alignment.
    Cervi GH; Flores CD; Thompson CE
    Database (Oxford); 2023 Aug; 2023():. PubMed ID: 37566631
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A compression method for DNA.
    Du S; Li J; Bian N
    PLoS One; 2020; 15(11):e0238220. PubMed ID: 33237908
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.