578 related articles for article (PubMed ID: 31871149)
1. DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products.
Merwin NJ; Mousa WK; Dejong CA; Skinnider MA; Cannon MJ; Li H; Dial K; Gunabalasingam M; Johnston C; Magarvey NA
Proc Natl Acad Sci U S A; 2020 Jan; 117(1):371-380. PubMed ID: 31871149
[TBL] [Abstract][Full Text] [Related]
2. Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining.
Skinnider MA; Johnston CW; Edgar RE; Dejong CA; Merwin NJ; Rees PN; Magarvey NA
Proc Natl Acad Sci U S A; 2016 Oct; 113(42):E6343-E6351. PubMed ID: 27698135
[TBL] [Abstract][Full Text] [Related]
3. New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products.
Ortega MA; van der Donk WA
Cell Chem Biol; 2016 Jan; 23(1):31-44. PubMed ID: 26933734
[TBL] [Abstract][Full Text] [Related]
4. Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era.
Hetrick KJ; van der Donk WA
Curr Opin Chem Biol; 2017 Jun; 38():36-44. PubMed ID: 28260651
[TBL] [Abstract][Full Text] [Related]
5. Expansion of RiPP biosynthetic space through integration of pan-genomics and machine learning uncovers a novel class of lanthipeptides.
Kloosterman AM; Cimermancic P; Elsayed SS; Du C; Hadjithomas M; Donia MS; Fischbach MA; van Wezel GP; Medema MH
PLoS Biol; 2020 Dec; 18(12):e3001026. PubMed ID: 33351797
[TBL] [Abstract][Full Text] [Related]
6. Automated genome mining of ribosomal peptide natural products.
Mohimani H; Kersten RD; Liu WT; Wang M; Purvine SO; Wu S; Brewer HM; Pasa-Tolic L; Bandeira N; Moore BS; Pevzner PA; Dorrestein PC
ACS Chem Biol; 2014 Jul; 9(7):1545-51. PubMed ID: 24802639
[TBL] [Abstract][Full Text] [Related]
7. Mechanisms of action of ribosomally synthesized and posttranslationally modified peptides (RiPPs).
Cao L; Do T; Link AJ
J Ind Microbiol Biotechnol; 2021 Jun; 48(3-4):. PubMed ID: 33928382
[TBL] [Abstract][Full Text] [Related]
8. Uncovering the unexplored diversity of thioamidated ribosomal peptides in Actinobacteria using the RiPPER genome mining tool.
Santos-Aberturas J; Chandra G; Frattaruolo L; Lacret R; Pham TH; Vior NM; Eyles TH; Truman AW
Nucleic Acids Res; 2019 May; 47(9):4624-4637. PubMed ID: 30916321
[TBL] [Abstract][Full Text] [Related]
9. Metabolome-guided genome mining of RiPP natural products.
Zdouc MM; van der Hooft JJJ; Medema MH
Trends Pharmacol Sci; 2023 Aug; 44(8):532-541. PubMed ID: 37391295
[TBL] [Abstract][Full Text] [Related]
10. The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles.
Cox CL; Doroghazi JR; Mitchell DA
BMC Genomics; 2015 Oct; 16():778. PubMed ID: 26462797
[TBL] [Abstract][Full Text] [Related]
11. Genome mining for ribosomally synthesized and post-translationally modified peptides (RiPPs) in anaerobic bacteria.
Letzel AC; Pidot SJ; Hertweck C
BMC Genomics; 2014 Nov; 15(1):983. PubMed ID: 25407095
[TBL] [Abstract][Full Text] [Related]
12. Recent advances in the biosynthesis of RiPPs from multicore-containing precursor peptides.
Rubin GM; Ding Y
J Ind Microbiol Biotechnol; 2020 Oct; 47(9-10):659-674. PubMed ID: 32617877
[TBL] [Abstract][Full Text] [Related]
13. Genome mining for ribosomally synthesized natural products.
Velásquez JE; van der Donk WA
Curr Opin Chem Biol; 2011 Feb; 15(1):11-21. PubMed ID: 21095156
[TBL] [Abstract][Full Text] [Related]
14. Expanded genetic code for the engineering of ribosomally synthetized and post-translationally modified peptide natural products (RiPPs).
Budisa N
Curr Opin Biotechnol; 2013 Aug; 24(4):591-8. PubMed ID: 23537814
[TBL] [Abstract][Full Text] [Related]
15. Uncovering Novel Peptide Chemistry from Bacterial Natural Products.
Hubrich F; Lotti A; Scott TA; Piel J
Chimia (Aarau); 2021 Jun; 75(6):543-547. PubMed ID: 34233822
[TBL] [Abstract][Full Text] [Related]
16. Discovery of novel fungal RiPP biosynthetic pathways and their application for the development of peptide therapeutics.
Vogt E; Künzler M
Appl Microbiol Biotechnol; 2019 Jul; 103(14):5567-5581. PubMed ID: 31147756
[TBL] [Abstract][Full Text] [Related]
17. Genome mining for ribosomally synthesised and post-translationally modified peptides (RiPPs) reveals undiscovered bioactive potentials of actinobacteria.
Poorinmohammad N; Bagheban-Shemirani R; Hamedi J
Antonie Van Leeuwenhoek; 2019 Oct; 112(10):1477-1499. PubMed ID: 31123844
[TBL] [Abstract][Full Text] [Related]
18. Recent Advances in the Discovery and Biosynthetic Study of Eukaryotic RiPP Natural Products.
Luo S; Dong SH
Molecules; 2019 Apr; 24(8):. PubMed ID: 31003555
[TBL] [Abstract][Full Text] [Related]
19. RiPPMiner-Genome: A Web Resource for Automated Prediction of Crosslinked Chemical Structures of RiPPs by Genome Mining.
Agrawal P; Amir S; Deepak ; Barua D; Mohanty D
J Mol Biol; 2021 May; 433(11):166887. PubMed ID: 33972022
[TBL] [Abstract][Full Text] [Related]
20. MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities.
Cao L; Gurevich A; Alexander KL; Naman CB; Leão T; Glukhov E; Luzzatto-Knaan T; Vargas F; Quinn R; Bouslimani A; Nothias LF; Singh NK; Sanders JG; Benitez RAS; Thompson LR; Hamid MN; Morton JT; Mikheenko A; Shlemov A; Korobeynikov A; Friedberg I; Knight R; Venkateswaran K; Gerwick WH; Gerwick L; Dorrestein PC; Pevzner PA; Mohimani H
Cell Syst; 2019 Dec; 9(6):600-608.e4. PubMed ID: 31629686
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]