BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

282 related articles for article (PubMed ID: 31898513)

  • 1. Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies.
    Waterhouse RM; Aganezov S; Anselmetti Y; Lee J; Ruzzante L; Reijnders MJMF; Feron R; Bérard S; George P; Hahn MW; Howell PI; Kamali M; Koren S; Lawson D; Maslen G; Peery A; Phillippy AM; Sharakhova MV; Tannier E; Unger MF; Zhang SV; Alekseyev MA; Besansky NJ; Chauve C; Emrich SJ; Sharakhov IV
    BMC Biol; 2020 Jan; 18(1):1. PubMed ID: 31898513
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Partial-arm translocations in evolution of malaria mosquitoes revealed by high-coverage physical mapping of the Anopheles atroparvus genome.
    Artemov GN; Bondarenko SM; Naumenko AN; Stegniy VN; Sharakhova MV; Sharakhov IV
    BMC Genomics; 2018 Apr; 19(1):278. PubMed ID: 29688842
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis.
    Zamyatin A; Avdeyev P; Liang J; Sharma A; Chen C; Lukyanchikova V; Alexeev N; Tu Z; Alekseyev MA; Sharakhov IV
    Gigascience; 2021 Mar; 10(3):. PubMed ID: 33718948
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The Physical Genome Mapping of Anopheles albimanus Corrected Scaffold Misassemblies and Identified Interarm Rearrangements in Genus Anopheles.
    Artemov GN; Peery AN; Jiang X; Tu Z; Stegniy VN; Sharakhova MV; Sharakhov IV
    G3 (Bethesda); 2017 Jan; 7(1):155-164. PubMed ID: 27821634
    [TBL] [Abstract][Full Text] [Related]  

  • 5. CSA: A high-throughput chromosome-scale assembly pipeline for vertebrate genomes.
    Kuhl H; Li L; Wuertz S; Stöck M; Liang XF; Klopp C
    Gigascience; 2020 May; 9(5):. PubMed ID: 32449778
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Physical Mapping of the
    Rafael MS; Bridi LC; Sharakhov IV; Marinotti O; Sharakhova MV; Timoshevskiy V; Guimarães-Marques GM; Santos VS; da Silva CGN; Astolfi-Filho S; Tadei WP
    Insects; 2021 Feb; 12(2):. PubMed ID: 33671870
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Near-Chromosome Level Genome Assembly of
    Chida AR; Ravi S; Jayaprasad S; Paul K; Saha J; Suresh C; Whadgar S; Kumar N; Rao K R; Ghosh C; Choudhary B; Subramani S; Srinivasan S
    Front Genet; 2020; 11():565626. PubMed ID: 33312190
    [TBL] [Abstract][Full Text] [Related]  

  • 8. HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding.
    Solares EA; Tao Y; Long AD; Gaut BS
    BMC Bioinformatics; 2021 Jan; 22(1):9. PubMed ID: 33407090
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inferring synteny between genome assemblies: a systematic evaluation.
    Liu D; Hunt M; Tsai IJ
    BMC Bioinformatics; 2018 Jan; 19(1):26. PubMed ID: 29382321
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi.
    Jiang X; Peery A; Hall AB; Sharma A; Chen XG; Waterhouse RM; Komissarov A; Riehle MM; Shouche Y; Sharakhova MV; Lawson D; Pakpour N; Arensburger P; Davidson VL; Eiglmeier K; Emrich S; George P; Kennedy RC; Mane SP; Maslen G; Oringanje C; Qi Y; Settlage R; Tojo M; Tubio JM; Unger MF; Wang B; Vernick KD; Ribeiro JM; James AA; Michel K; Riehle MA; Luckhart S; Sharakhov IV; Tu Z
    Genome Biol; 2014 Sep; 15(9):459. PubMed ID: 25244985
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A chromosome-level genome assembly for the eastern fence lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology.
    Westfall AK; Telemeco RS; Grizante MB; Waits DS; Clark AD; Simpson DY; Klabacka RL; Sullivan AP; Perry GH; Sears MW; Cox CL; Cox RM; Gifford ME; John-Alder HB; Langkilde T; Angilletta MJ; Leaché AD; Tollis M; Kusumi K; Schwartz TS
    Gigascience; 2021 Oct; 10(10):. PubMed ID: 34599334
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improving Nelumbo nucifera genome assemblies using high-resolution genetic maps and BioNano genome mapping reveals ancient chromosome rearrangements.
    Gui S; Peng J; Wang X; Wu Z; Cao R; Salse J; Zhang H; Zhu Z; Xia Q; Quan Z; Shu L; Ke W; Ding Y
    Plant J; 2018 May; 94(4):721-734. PubMed ID: 29575237
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Comparative physical genome mapping of malaria vectors Anopheles sinensis and Anopheles gambiae.
    Wei Y; Cheng B; Zhu G; Shen D; Liang J; Wang C; Wang J; Tang J; Cao J; Sharakhov IV; Xia A
    Malar J; 2017 Jun; 16(1):235. PubMed ID: 28583133
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Hi-C scaffolded short- and long-read genome assemblies of the California sea lion are broadly consistent for syntenic inference across 45 million years of evolution.
    Peart CR; Williams C; Pophaly SD; Neely BA; Gulland FMD; Adams DJ; Ng BL; Cheng W; Goebel ME; Fedrigo O; Haase B; Mountcastle J; Fungtammasan A; Formenti G; Collins J; Wood J; Sims Y; Torrance J; Tracey A; Howe K; Rhie A; Hoffman JI; Johnson J; Jarvis ED; Breen M; Wolf JBW
    Mol Ecol Resour; 2021 Oct; 21(7):2455-2470. PubMed ID: 34097816
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High-throughput physical mapping of chromosomes using automated in situ hybridization.
    George P; Sharakhova MV; Sharakhov IV
    J Vis Exp; 2012 Jun; (64):. PubMed ID: 22782181
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular tools for studying the major malaria vector Anopheles funestus: improving the utility of the genome using a comparative poly(A) and Ribo-Zero RNAseq analysis.
    Weedall GD; Irving H; Hughes MA; Wondji CS
    BMC Genomics; 2015 Nov; 16():931. PubMed ID: 26573092
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Long-read sequencing improves assembly of Trichinella genomes 10-fold, revealing substantial synteny between lineages diverged over 7 million years.
    Thompson PC; Zarlenga DS; Liu MY; Rosenthal BM
    Parasitology; 2017 Sep; 144(10):1302-1315. PubMed ID: 28583210
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species.
    Voorhies M; Cohen S; Shea TP; Petrus S; Muñoz JF; Poplawski S; Goldman WE; Michael TP; Cuomo CA; Sil A; Beyhan S
    mBio; 2022 Feb; 13(1):e0257421. PubMed ID: 35089059
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes.
    Anselmetti Y; Duchemin W; Tannier E; Chauve C; Bérard S
    BMC Genomics; 2018 May; 19(Suppl 2):96. PubMed ID: 29764366
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A chromosome-scale assembly of the major African malaria vector Anopheles funestus.
    Ghurye J; Koren S; Small ST; Redmond S; Howell P; Phillippy AM; Besansky NJ
    Gigascience; 2019 Jun; 8(6):. PubMed ID: 31157884
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.