These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

259 related articles for article (PubMed ID: 31909999)

  • 1. Flexible Fitting of Biomolecular Structures to Atomic Force Microscopy Images via Biased Molecular Simulations.
    Niina T; Fuchigami S; Takada S
    J Chem Theory Comput; 2020 Feb; 16(2):1349-1358. PubMed ID: 31909999
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Rigid-body fitting to atomic force microscopy images for inferring probe shape and biomolecular structure.
    Niina T; Matsunaga Y; Takada S
    PLoS Comput Biol; 2021 Jul; 17(7):e1009215. PubMed ID: 34283829
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Case Report: Bayesian Statistical Inference of Experimental Parameters via Biomolecular Simulations: Atomic Force Microscopy.
    Fuchigami S; Niina T; Takada S
    Front Mol Biosci; 2021; 8():636940. PubMed ID: 33778008
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Reconstruction of low-resolution molecular structures from simulated atomic force microscopy images.
    Dasgupta B; Miyashita O; Tama F
    Biochim Biophys Acta Gen Subj; 2020 Feb; 1864(2):129420. PubMed ID: 31472175
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Inferring Conformational State of Myosin Motor in an Atomic Force Microscopy Image
    Fuchigami S; Takada S
    Front Mol Biosci; 2022; 9():882989. PubMed ID: 35573735
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Particle Filter Method to Integrate High-Speed Atomic Force Microscopy Measurements with Biomolecular Simulations.
    Fuchigami S; Niina T; Takada S
    J Chem Theory Comput; 2020 Oct; 16(10):6609-6619. PubMed ID: 32805119
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Applications of high-speed atomic force microscopy to real-time visualization of dynamic biomolecular processes.
    Uchihashi T; Scheuring S
    Biochim Biophys Acta Gen Subj; 2018 Feb; 1862(2):229-240. PubMed ID: 28716648
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Simulation atomic force microscopy for atomic reconstruction of biomolecular structures from resolution-limited experimental images.
    Amyot R; Marchesi A; Franz CM; Casuso I; Flechsig H
    PLoS Comput Biol; 2022 Mar; 18(3):e1009970. PubMed ID: 35294442
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Modeling Conformational Transitions of Biomolecules from Atomic Force Microscopy Images using Normal Mode Analysis.
    Wu X; Miyashita O; Tama F
    J Phys Chem B; 2024 Oct; 128(39):9363-9372. PubMed ID: 39319845
    [TBL] [Abstract][Full Text] [Related]  

  • 10. End-to-end differentiable blind tip reconstruction for noisy atomic force microscopy images.
    Matsunaga Y; Fuchigami S; Ogane T; Takada S
    Sci Rep; 2023 Jan; 13(1):129. PubMed ID: 36599879
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Development of hidden Markov modeling method for molecular orientations and structure estimation from high-speed atomic force microscopy time-series images.
    Ogane T; Noshiro D; Ando T; Yamashita A; Sugita Y; Matsunaga Y
    PLoS Comput Biol; 2022 Dec; 18(12):e1010384. PubMed ID: 36580448
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Reconstruction of Three-Dimensional Conformations of Bacterial ClpB from High-Speed Atomic-Force-Microscopy Images.
    Dasgupta B; Miyashita O; Uchihashi T; Tama F
    Front Mol Biosci; 2021; 8():704274. PubMed ID: 34422905
    [TBL] [Abstract][Full Text] [Related]  

  • 13. BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics.
    Amyot R; Flechsig H
    PLoS Comput Biol; 2020 Nov; 16(11):e1008444. PubMed ID: 33206646
    [TBL] [Abstract][Full Text] [Related]  

  • 14. [Application of molecular dynamics simulation to the interpretation of atomic force microscopy data].
    Godzi MG; Tolstova AP; Oferkin IV
    Biofizika; 2010; 55(3):415-23. PubMed ID: 20586320
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Atomic Force Microscopy: An Introduction.
    Piontek MC; Roos WH
    Methods Mol Biol; 2018; 1665():243-258. PubMed ID: 28940073
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Visualizing Molecular Dynamics by High-Speed Atomic Force Microscopy.
    van Ewijk C; Maity S; Roos WH
    Methods Mol Biol; 2024; 2694():355-372. PubMed ID: 37824013
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Subnanometer-scale imaging of nanobio-interfaces by frequency modulation atomic force microscopy.
    Fukuma T
    Biochem Soc Trans; 2020 Aug; 48(4):1675-1682. PubMed ID: 32779720
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The conformation and dynamics of P-glycoprotein in a lipid bilayer investigated by atomic force microscopy.
    Sigdel KP; Wilt LA; Marsh BP; Roberts AG; King GM
    Biochem Pharmacol; 2018 Oct; 156():302-311. PubMed ID: 30121251
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Fully Atomistic Simulations of Protein Unfolding in Low Speed Atomic Force Microscope and Force Clamp Experiments with the Help of Boxed Molecular Dynamics.
    Booth JJ; Shalashilin DV
    J Phys Chem B; 2016 Feb; 120(4):700-8. PubMed ID: 26760898
    [TBL] [Abstract][Full Text] [Related]  

  • 20. High-speed atomic force microscopy.
    Ando T
    Curr Opin Chem Biol; 2019 Aug; 51():105-112. PubMed ID: 31254806
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.