266 related articles for article (PubMed ID: 31933010)
21. Statistical and molecular dynamics studies of buried waters in globular proteins.
Park S; Saven JG
Proteins; 2005 Aug; 60(3):450-63. PubMed ID: 15937899
[TBL] [Abstract][Full Text] [Related]
22. Amino acid pairing preferences in parallel beta-sheets in proteins.
Fooks HM; Martin AC; Woolfson DN; Sessions RB; Hutchinson EG
J Mol Biol; 2006 Feb; 356(1):32-44. PubMed ID: 16337654
[TBL] [Abstract][Full Text] [Related]
23. Amino acid pairing at the N- and C-termini of helical segments in proteins.
Fonseca NA; Camacho R; Magalhães AL
Proteins; 2008 Jan; 70(1):188-96. PubMed ID: 17654550
[TBL] [Abstract][Full Text] [Related]
24. Free energies of amino acid side-chain rotamers in alpha-helices, beta-sheets and alpha-helix N-caps.
Stapley BJ; Doig AJ
J Mol Biol; 1997 Sep; 272(3):456-64. PubMed ID: 9325103
[TBL] [Abstract][Full Text] [Related]
25. Incorporation of non-local interactions in protein secondary structure prediction from the amino acid sequence.
Frishman D; Argos P
Protein Eng; 1996 Feb; 9(2):133-42. PubMed ID: 9005434
[TBL] [Abstract][Full Text] [Related]
26. Hydrophobic interactions at the Ccap position of the C-capping motif of alpha-helices.
Ermolenko DN; Thomas ST; Aurora R; Gronenborn AM; Makhatadze GI
J Mol Biol; 2002 Sep; 322(1):123-35. PubMed ID: 12215419
[TBL] [Abstract][Full Text] [Related]
27. Secondary structures at polypeptide-chain termini and their features.
Bhattacharyya R; Pal D; Chakrabarti P
Acta Crystallogr D Biol Crystallogr; 2002 Oct; 58(Pt 10 Pt 2):1793-802. PubMed ID: 12351823
[TBL] [Abstract][Full Text] [Related]
28. Crystallographic characterization of helical secondary structures in 2:1 and 1:2 alpha/beta-peptides.
Choi SH; Guzei IA; Spencer LC; Gellman SH
J Am Chem Soc; 2009 Mar; 131(8):2917-24. PubMed ID: 19203269
[TBL] [Abstract][Full Text] [Related]
29. Free energy determinants of secondary structure formation: II. Antiparallel beta-sheets.
Yang AS; Honig B
J Mol Biol; 1995 Sep; 252(3):366-76. PubMed ID: 7563057
[TBL] [Abstract][Full Text] [Related]
30. Prediction of protein secondary structure content.
Liu W; Chou KC
Protein Eng; 1999 Dec; 12(12):1041-50. PubMed ID: 10611397
[TBL] [Abstract][Full Text] [Related]
31. Interactions between a helical residue and tertiary structures: helix propensities in small peptides and in native proteins.
Qian H; Chan SI
J Mol Biol; 1996 Aug; 261(2):279-88. PubMed ID: 8757294
[TBL] [Abstract][Full Text] [Related]
32. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
Avbelj F
J Mol Biol; 2000 Jul; 300(5):1335-59. PubMed ID: 10903873
[TBL] [Abstract][Full Text] [Related]
33. Structural and functional analyses of PolyProline-II helices in globular proteins.
Kumar P; Bansal M
J Struct Biol; 2016 Dec; 196(3):414-425. PubMed ID: 27637571
[TBL] [Abstract][Full Text] [Related]
34. Predicting alpha-helix and beta-strand segments of globular proteins.
Solovyev VV; Salamov AA
Comput Appl Biosci; 1994 Dec; 10(6):661-9. PubMed ID: 7704665
[TBL] [Abstract][Full Text] [Related]
35. Effect of charged amino acid side chain length at non-hydrogen bonded strand positions on β-hairpin stability.
Kuo LH; Li JH; Kuo HT; Hung CY; Tsai HY; Chiu WC; Wu CH; Wang WR; Yang PA; Yao YC; Wong TW; Huang SJ; Huang SL; Cheng RP
Biochemistry; 2013 Nov; 52(44):7785-97. PubMed ID: 24156236
[TBL] [Abstract][Full Text] [Related]
36. Sequence and structure patterns in proteins from an analysis of the shortest helices: implications for helix nucleation.
Pal L; Chakrabarti P; Basu G
J Mol Biol; 2003 Feb; 326(1):273-91. PubMed ID: 12547209
[TBL] [Abstract][Full Text] [Related]
37. Gabapentin: a stereochemically constrained gamma amino acid residue in hybrid peptide design.
Vasudev PG; Chatterjee S; Shamala N; Balaram P
Acc Chem Res; 2009 Oct; 42(10):1628-39. PubMed ID: 19572698
[TBL] [Abstract][Full Text] [Related]
38. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
Ma B; Nussinov R
J Mol Biol; 2000 Mar; 296(4):1091-104. PubMed ID: 10686106
[TBL] [Abstract][Full Text] [Related]
39. The use of amino acid patterns of classified helices and strands in secondary structure prediction.
Zhu ZY; Blundell TL
J Mol Biol; 1996 Jul; 260(2):261-76. PubMed ID: 8764405
[TBL] [Abstract][Full Text] [Related]
40. Folding type specific secondary structure propensities of synonymous codons.
Gu W; Zhou T; Ma J; Sun X; Lu Z
IEEE Trans Nanobioscience; 2003 Sep; 2(3):150-7. PubMed ID: 15376949
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]