These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

199 related articles for article (PubMed ID: 31950463)

  • 1. Atomistic insight into sequence-directed DNA bending and minicircle formation propensity in the absence and presence of phased A-tracts.
    Mills A; Gago F
    J Comput Aided Mol Des; 2020 Mar; 34(3):253-265. PubMed ID: 31950463
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility.
    McConnell KJ; Beveridge DL
    J Mol Biol; 2001 Nov; 314(1):23-40. PubMed ID: 11724529
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DNA bending: the prevalence of kinkiness and the virtues of normality.
    Dickerson RE
    Nucleic Acids Res; 1998 Apr; 26(8):1906-26. PubMed ID: 9518483
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Molecular dynamics simulations of DNA curvature and flexibility: helix phasing and premelting.
    Beveridge DL; Dixit SB; Barreiro G; Thayer KM
    Biopolymers; 2004 Feb; 73(3):380-403. PubMed ID: 14755574
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence elements responsible for DNA curvature.
    Haran TE; Kahn JD; Crothers DM
    J Mol Biol; 1994 Nov; 244(2):135-43. PubMed ID: 7966325
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.
    Young MA; Beveridge DL
    J Mol Biol; 1998 Aug; 281(4):675-87. PubMed ID: 9710539
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A-Tract bending: insights into experimental structures by computational models.
    Strahs D; Schlick T
    J Mol Biol; 2000 Aug; 301(3):643-63. PubMed ID: 10966775
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Helix bending as a factor in protein/DNA recognition.
    Dickerson RE; Chiu TK
    Biopolymers; 1997; 44(4):361-403. PubMed ID: 9782776
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Molecular dynamics studies of sequence-directed curvature in bending locus of trypanosome kinetoplast DNA.
    Mazur AK
    J Biomol Struct Dyn; 2001 Jun; 18(6):832-43. PubMed ID: 11444372
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Phased adenine tracts in double-stranded RNA do not induce sequence-directed bending.
    Wang YH; Howard MT; Griffith JD
    Biochemistry; 1991 Jun; 30(22):5443-9. PubMed ID: 2036412
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Intrinsic bending and deformability at the T-A step of CCTTTAAAGG: a comparative analysis of T-A and A-T steps within A-tracts.
    Mack DR; Chiu TK; Dickerson RE
    J Mol Biol; 2001 Oct; 312(5):1037-49. PubMed ID: 11580248
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The unique structure of A-tracts and intrinsic DNA bending.
    Haran TE; Mohanty U
    Q Rev Biophys; 2009 Feb; 42(1):41-81. PubMed ID: 19508739
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Double-stranded RNA bending by AU-tract sequences.
    Marin-Gonzalez A; Aicart-Ramos C; Marin-Baquero M; Martín-González A; Suomalainen M; Kannan A; Vilhena JG; Greber UF; Moreno-Herrero F; Pérez R
    Nucleic Acids Res; 2020 Dec; 48(22):12917-12928. PubMed ID: 33245767
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The organic crystallizing agent 2-methyl-2,4-pentanediol reduces DNA curvature by means of structural changes in A-tracts.
    Dlakic M; Park K; Griffith JD; Harvey SC; Harrington RE
    J Biol Chem; 1996 Jul; 271(30):17911-9. PubMed ID: 8663567
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Implications of the dependence of the elastic properties of DNA on nucleotide sequence.
    Olson WK; Swigon D; Coleman BD
    Philos Trans A Math Phys Eng Sci; 2004 Jul; 362(1820):1403-22. PubMed ID: 15306458
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DNA A-tract bending in three dimensions: solving the dA4T4 vs. dT4A4 conundrum.
    Stefl R; Wu H; Ravindranathan S; Sklenár V; Feigon J
    Proc Natl Acad Sci U S A; 2004 Feb; 101(5):1177-82. PubMed ID: 14739342
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps.
    Goodsell DS; Kaczor-Grzeskowiak M; Dickerson RE
    J Mol Biol; 1994 May; 239(1):79-96. PubMed ID: 8196049
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Crystal structure of CATGGCCATG and its implications for A-tract bending models.
    Goodsell DS; Kopka ML; Cascio D; Dickerson RE
    Proc Natl Acad Sci U S A; 1993 Apr; 90(7):2930-4. PubMed ID: 8464909
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A refined prediction method for gel retardation of DNA oligonucleotides from dinucleotide step parameters: reconciliation of DNA bending models with crystal structure data.
    Liu Y; Beveridge DL
    J Biomol Struct Dyn; 2001 Feb; 18(4):505-26. PubMed ID: 11245247
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes.
    Young MA; Ravishanker G; Beveridge DL; Berman HM
    Biophys J; 1995 Jun; 68(6):2454-68. PubMed ID: 7647248
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.