BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

156 related articles for article (PubMed ID: 31963501)

  • 1. The Impact of Primer Design on Amplicon-Based Metagenomic Profiling Accuracy: Detailed Insights into Bifidobacterial Community Structure.
    Mancabelli L; Milani C; Lugli GA; Fontana F; Turroni F; van Sinderen D; Ventura M
    Microorganisms; 2020 Jan; 8(1):. PubMed ID: 31963501
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Impact of Preservation Method and 16S rRNA Hypervariable Region on Gut Microbiota Profiling.
    Chen Z; Hui PC; Hui M; Yeoh YK; Wong PY; Chan MCW; Wong MCS; Ng SC; Chan FKL; Chan PKS
    mSystems; 2019; 4(1):. PubMed ID: 30834331
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluation of bifidobacterial community composition in the human gut by means of a targeted amplicon sequencing (ITS) protocol.
    Milani C; Lugli GA; Turroni F; Mancabelli L; Duranti S; Viappiani A; Mangifesta M; Segata N; van Sinderen D; Ventura M
    FEMS Microbiol Ecol; 2014 Nov; 90(2):493-503. PubMed ID: 25117972
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evaluation of 16S rRNA Gene Primer Pairs for Monitoring Microbial Community Structures Showed High Reproducibility within and Low Comparability between Datasets Generated with Multiple Archaeal and Bacterial Primer Pairs.
    Fischer MA; Güllert S; Neulinger SC; Streit WR; Schmitz RA
    Front Microbiol; 2016; 7():1297. PubMed ID: 27602022
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
    BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Impact of 16S rRNA Gene Redundancy and Primer Pair Selection on the Quantification and Classification of Oral Microbiota in Next-Generation Sequencing.
    Regueira-Iglesias A; Vázquez-González L; Balsa-Castro C; Blanco-Pintos T; Vila-Blanco N; Carreira MJ; Tomás I
    Microbiol Spectr; 2023 Feb; 11(2):e0439822. PubMed ID: 36779795
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing.
    Huber P; Cornejo-Castillo FM; Ferrera I; Sánchez P; Logares R; Metz S; Balagué V; Acinas SG; Gasol JM; Unrein F
    Appl Environ Microbiol; 2019 Apr; 85(7):. PubMed ID: 30709827
    [TBL] [Abstract][Full Text] [Related]  

  • 8. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
    Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
    BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluation of primer pairs for microbiome profiling from soils to humans within the One Health framework.
    Wasimuddin ; Schlaeppi K; Ronchi F; Leib SL; Erb M; Ramette A
    Mol Ecol Resour; 2020 Nov; 20(6):1558-1571. PubMed ID: 32599660
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Development of a novel long-range 16S rRNA universal primer set for metagenomic analysis of gastrointestinal microbiota in newborn infants.
    Ku HJ; Lee JH
    J Microbiol Biotechnol; 2014 Jun; 24(6):812-22. PubMed ID: 24722376
    [TBL] [Abstract][Full Text] [Related]  

  • 11. 16S rRNA Gene Primer Validation for Bacterial Diversity Analysis of Vegetable Products.
    Nakano M
    J Food Prot; 2018 May; 81(5):848-859. PubMed ID: 29664320
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparative Evaluation of Four Bacteria-Specific Primer Pairs for 16S rRNA Gene Surveys.
    Thijs S; Op De Beeck M; Beckers B; Truyens S; Stevens V; Van Hamme JD; Weyens N; Vangronsveld J
    Front Microbiol; 2017; 8():494. PubMed ID: 28400755
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.
    Ziesemer KA; Mann AE; Sankaranarayanan K; Schroeder H; Ozga AT; Brandt BW; Zaura E; Waters-Rist A; Hoogland M; Salazar-García DC; Aldenderfer M; Speller C; Hendy J; Weston DA; MacDonald SJ; Thomas GH; Collins MJ; Lewis CM; Hofman C; Warinner C
    Sci Rep; 2015 Nov; 5():16498. PubMed ID: 26563586
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Deciphering the Bifidobacterial Populations within the Canine and Feline Gut Microbiota.
    Alessandri G; Milani C; Mancabelli L; Longhi G; Anzalone R; Lugli GA; Duranti S; Turroni F; Ossiprandi MC; van Sinderen D; Ventura M
    Appl Environ Microbiol; 2020 Mar; 86(7):. PubMed ID: 32005736
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Can Targeting Non-Contiguous V-Regions With Paired-End Sequencing Improve 16S rRNA-Based Taxonomic Resolution of Microbiomes?: An
    Pinna NK; Dutta A; Monzoorul Haque M; Mande SS
    Front Genet; 2019; 10():653. PubMed ID: 31354793
    [No Abstract]   [Full Text] [Related]  

  • 16. [Comparison of intestinal microbial community succession based on different universal primer sets].
    Yang X; Wu B; Liu C; Dong Y; Zeng X; Li X
    Sheng Wu Gong Cheng Xue Bao; 2020 Dec; 36(12):2556-2565. PubMed ID: 33398954
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys.
    Walters W; Hyde ER; Berg-Lyons D; Ackermann G; Humphrey G; Parada A; Gilbert JA; Jansson JK; Caporaso JG; Fuhrman JA; Apprill A; Knight R
    mSystems; 2016; 1(1):. PubMed ID: 27822518
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of different 16S rRNA gene hypervariable regions and reference databases for profiling engineered microbiota structure and functional guilds in a swine wastewater treatment plant.
    Lin L; Ju F
    Interface Focus; 2023 Aug; 13(4):20230012. PubMed ID: 37303742
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comparison of Two 16S rRNA Primers (V3-V4 and V4-V5) for Studies of Arctic Microbial Communities.
    Fadeev E; Cardozo-Mino MG; Rapp JZ; Bienhold C; Salter I; Salman-Carvalho V; Molari M; Tegetmeyer HE; Buttigieg PL; Boetius A
    Front Microbiol; 2021; 12():637526. PubMed ID: 33664723
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
    Myer PR; Kim M; Freetly HC; Smith TPL
    J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.