These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

145 related articles for article (PubMed ID: 32009147)

  • 101. Transcriptionally active enhancers in human cancer cells.
    Lidschreiber K; Jung LA; von der Emde H; Dave K; Taipale J; Cramer P; Lidschreiber M
    Mol Syst Biol; 2021 Jan; 17(1):e9873. PubMed ID: 33502116
    [TBL] [Abstract][Full Text] [Related]  

  • 102. IDR2D identifies reproducible genomic interactions.
    Krismer K; Guo Y; Gifford DK
    Nucleic Acids Res; 2020 Apr; 48(6):e31. PubMed ID: 32009147
    [TBL] [Abstract][Full Text] [Related]  

  • 103. MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.
    Juric I; Yu M; Abnousi A; Raviram R; Fang R; Zhao Y; Zhang Y; Qiu Y; Yang Y; Li Y; Ren B; Hu M
    PLoS Comput Biol; 2019 Apr; 15(4):e1006982. PubMed ID: 30986246
    [TBL] [Abstract][Full Text] [Related]  

  • 104. Methods for comparative ChIA-PET and Hi-C data analysis.
    Capurso D; Tang Z; Ruan Y
    Methods; 2020 Jan; 170():69-74. PubMed ID: 31629084
    [TBL] [Abstract][Full Text] [Related]  

  • 105. Mango: a bias-correcting ChIA-PET analysis pipeline.
    Phanstiel DH; Boyle AP; Heidari N; Snyder MP
    Bioinformatics; 2015 Oct; 31(19):3092-8. PubMed ID: 26034063
    [TBL] [Abstract][Full Text] [Related]  

  • 106. Identification of significant chromatin contacts from HiChIP data by FitHiChIP.
    Bhattacharyya S; Chandra V; Vijayanand P; Ay F
    Nat Commun; 2019 Sep; 10(1):4221. PubMed ID: 31530818
    [TBL] [Abstract][Full Text] [Related]  

  • 107. NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains.
    Lhoumaud P; Badri S; Rodriguez-Hernaez J; Sakellaropoulos T; Sethia G; Kloetgen A; Cornwell M; Bhattacharyya S; Ay F; Bonneau R; Tsirigos A; Skok JA
    Nat Commun; 2019 Oct; 10(1):4843. PubMed ID: 31649247
    [TBL] [Abstract][Full Text] [Related]  

  • 108. SCALE method for single-cell ATAC-seq analysis via latent feature extraction.
    Xiong L; Xu K; Tian K; Shao Y; Tang L; Gao G; Zhang M; Jiang T; Zhang QC
    Nat Commun; 2019 Oct; 10(1):4576. PubMed ID: 31594952
    [TBL] [Abstract][Full Text] [Related]  

  • 109. Sci-Hi-C: A single-cell Hi-C method for mapping 3D genome organization in large number of single cells.
    Ramani V; Deng X; Qiu R; Lee C; Disteche CM; Noble WS; Shendure J; Duan Z
    Methods; 2020 Jan; 170():61-68. PubMed ID: 31536770
    [TBL] [Abstract][Full Text] [Related]  

  • 110. High resolution discovery of chromatin interactions.
    Guo Y; Krismer K; Closser M; Wichterle H; Gifford DK
    Nucleic Acids Res; 2019 Apr; 47(6):e35. PubMed ID: 30953075
    [TBL] [Abstract][Full Text] [Related]  

  • 111. Multiplex chromatin interactions with single-molecule precision.
    Zheng M; Tian SZ; Capurso D; Kim M; Maurya R; Lee B; Piecuch E; Gong L; Zhu JJ; Li Z; Wong CH; Ngan CY; Wang P; Ruan X; Wei CL; Ruan Y
    Nature; 2019 Feb; 566(7745):558-562. PubMed ID: 30778195
    [TBL] [Abstract][Full Text] [Related]  

  • 112. GenomeDISCO: a concordance score for chromosome conformation capture experiments using random walks on contact map graphs.
    Ursu O; Boley N; Taranova M; Wang YXR; Yardimci GG; Stafford Noble W; Kundaje A
    Bioinformatics; 2018 Aug; 34(16):2701-2707. PubMed ID: 29554289
    [TBL] [Abstract][Full Text] [Related]  

  • 113. hichipper: a preprocessing pipeline for calling DNA loops from HiChIP data.
    Lareau CA; Aryee MJ
    Nat Methods; 2018 Feb; 15(3):155-156. PubMed ID: 29489746
    [No Abstract]   [Full Text] [Related]  

  • 114. HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient.
    Yang T; Zhang F; Yardımcı GG; Song F; Hardison RC; Noble WS; Yue F; Li Q
    Genome Res; 2017 Nov; 27(11):1939-1949. PubMed ID: 28855260
    [TBL] [Abstract][Full Text] [Related]  

  • 115. HiC-spector: a matrix library for spectral and reproducibility analysis of Hi-C contact maps.
    Yan KK; Yardimci GG; Yan C; Noble WS; Gerstein M
    Bioinformatics; 2017 Jul; 33(14):2199-2201. PubMed ID: 28369339
    [TBL] [Abstract][Full Text] [Related]  

  • 116.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 117.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 118.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 119.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

  • 120.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.