These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
98 related articles for article (PubMed ID: 32017851)
1. From Nonequilibrium Single-Molecule Trajectories to Underlying Dynamics. Berezhkovskii AM; Makarov DE J Phys Chem Lett; 2020 Mar; 11(5):1682-1688. PubMed ID: 32017851 [TBL] [Abstract][Full Text] [Related]
2. Reconstructing folding energy landscapes from splitting probability analysis of single-molecule trajectories. Manuel AP; Lambert J; Woodside MT Proc Natl Acad Sci U S A; 2015 Jun; 112(23):7183-8. PubMed ID: 26039984 [TBL] [Abstract][Full Text] [Related]
3. Equilibrium sampling by reweighting nonequilibrium simulation trajectories. Yang C; Wan B; Xu S; Wang Y; Zhou X Phys Rev E; 2016 Mar; 93(3):033309. PubMed ID: 27078486 [TBL] [Abstract][Full Text] [Related]
4. Probing single-molecule protein spontaneous folding-unfolding conformational fluctuation dynamics: the multiple-state and multiple-pathway energy landscape. Wang Z; Lu HP J Phys Chem B; 2015 May; 119(21):6366-78. PubMed ID: 25812917 [TBL] [Abstract][Full Text] [Related]
5. Extension-Dependent Drift Velocity and Diffusion (DrDiff) Directly Reconstructs the Folding Free Energy Landscape of Atomic Force Microscopy Experiments. Freitas FC; Junio de Oliveira R J Phys Chem Lett; 2020 Feb; 11(3):800-807. PubMed ID: 31928018 [TBL] [Abstract][Full Text] [Related]
6. Reconstructing folding energy landscape profiles from nonequilibrium pulling curves with an inverse Weierstrass integral transform. Engel MC; Ritchie DB; Foster DA; Beach KS; Woodside MT Phys Rev Lett; 2014 Dec; 113(23):238104. PubMed ID: 25526163 [TBL] [Abstract][Full Text] [Related]
7. Extracting physics of life at the molecular level: A review of single-molecule data analyses. Colomb W; Sarkar SK Phys Life Rev; 2015 Jun; 13():107-37. PubMed ID: 25660417 [TBL] [Abstract][Full Text] [Related]
8. The free energy landscape analysis of protein (FIP35) folding dynamics. Krivov SV J Phys Chem B; 2011 Oct; 115(42):12315-24. PubMed ID: 21902225 [TBL] [Abstract][Full Text] [Related]
10. Non-Boltzmann stationary distributions and nonequilibrium relations in active baths. Argun A; Moradi AR; Pinçe E; Bagci GB; Imparato A; Volpe G Phys Rev E; 2016 Dec; 94(6-1):062150. PubMed ID: 28085327 [TBL] [Abstract][Full Text] [Related]
11. Principal component analysis of nonequilibrium molecular dynamics simulations. Post M; Wolf S; Stock G J Chem Phys; 2019 May; 150(20):204110. PubMed ID: 31153204 [TBL] [Abstract][Full Text] [Related]
12. Enhanced Sampling of an Atomic Model with Hybrid Nonequilibrium Molecular Dynamics-Monte Carlo Simulations Guided by a Coarse-Grained Model. Chen Y; Roux B J Chem Theory Comput; 2015 Aug; 11(8):3572-83. PubMed ID: 26574442 [TBL] [Abstract][Full Text] [Related]
13. Fast recovery of free energy landscapes via diffusion-map-directed molecular dynamics. Preto J; Clementi C Phys Chem Chem Phys; 2014 Sep; 16(36):19181-91. PubMed ID: 24955434 [TBL] [Abstract][Full Text] [Related]
14. Scattering off molecules far from equilibrium. Yong H; Ruddock JM; Stankus B; Ma L; Du W; Goff N; Chang Y; Zotev N; Bellshaw D; Boutet S; Carbajo S; Koglin JE; Liang M; Robinson JS; Kirrander A; Minitti MP; Weber PM J Chem Phys; 2019 Aug; 151(8):084301. PubMed ID: 31470697 [TBL] [Abstract][Full Text] [Related]
15. Mechanisms for achieving high speed and efficiency in biomolecular machines. Wagoner JA; Dill KA Proc Natl Acad Sci U S A; 2019 Mar; 116(13):5902-5907. PubMed ID: 30850521 [TBL] [Abstract][Full Text] [Related]
16. Putting Humpty-Dumpty Together: Clustering the Functional Dynamics of Single Biomolecular Machines Such as the Spliceosome. Rohlman CE; Blanco MR; Walter NG Methods Enzymol; 2016; 581():257-283. PubMed ID: 27793282 [TBL] [Abstract][Full Text] [Related]
17. Diffusion Monte Carlo study on temporal evolution of entropy and free energy in nonequilibrium processes. Tanaka S J Chem Phys; 2016 Mar; 144(9):094103. PubMed ID: 26957153 [TBL] [Abstract][Full Text] [Related]
18. Reconstructing equilibrium entropy and enthalpy profiles from non-equilibrium pulling. Jeong D; Andricioaei I J Chem Phys; 2013 Mar; 138(11):114110. PubMed ID: 23534630 [TBL] [Abstract][Full Text] [Related]
19. Calculating fifth-order Raman signals for various molecular liquids by equilibrium and nonequilibrium hybrid molecular dynamics simulation algorithms. Hasegawa T; Tanimura Y J Chem Phys; 2006 Aug; 125(7):074512. PubMed ID: 16942356 [TBL] [Abstract][Full Text] [Related]
20. Maximum caliber inference of nonequilibrium processes. Otten M; Stock G J Chem Phys; 2010 Jul; 133(3):034119. PubMed ID: 20649320 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]