BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

227 related articles for article (PubMed ID: 32025466)

  • 1. A roadmap for the computation of persistent homology.
    Otter N; Porter MA; Tillmann U; Grindrod P; Harrington HA
    EPJ Data Sci; 2017; 6(1):17. PubMed ID: 32025466
    [TBL] [Abstract][Full Text] [Related]  

  • 2. HERMES: PERSISTENT SPECTRAL GRAPH SOFTWARE.
    Wang R; Zhao R; Ribando-Gros E; Chen J; Tong Y; Wei GW
    Found Data Sci; 2021 Mar; 3(1):67-97. PubMed ID: 34485918
    [TBL] [Abstract][Full Text] [Related]  

  • 3. TREPH: A Plug-In Topological Layer for Graph Neural Networks.
    Ye X; Sun F; Xiang S
    Entropy (Basel); 2023 Feb; 25(2):. PubMed ID: 36832697
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dory: Computation of persistence diagrams up to dimension two for Vietoris-Rips filtrations of large data sets.
    Aggarwal M; Periwal V
    J Comput Sci; 2024 Jul; 79():. PubMed ID: 38774487
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Tight basis cycle representatives for persistent homology of large biological data sets.
    Aggarwal M; Periwal V
    PLoS Comput Biol; 2023 May; 19(5):e1010341. PubMed ID: 37253074
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Minimal Cycle Representatives in Persistent Homology Using Linear Programming: An Empirical Study With User's Guide.
    Li L; Thompson C; Henselman-Petrusek G; Giusti C; Ziegelmeier L
    Front Artif Intell; 2021; 4():681117. PubMed ID: 34708196
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Discrete Morse Sandwich: Fast Computation of Persistence Diagrams for Scalar Data - An Algorithm and A Benchmark.
    Guillou P; Vidal J; Tierny J
    IEEE Trans Vis Comput Graph; 2023 Jan; PP():. PubMed ID: 37021884
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Topological data analysis quantifies biological nano-structure from single molecule localization microscopy.
    Pike JA; Khan AO; Pallini C; Thomas SG; Mund M; Ries J; Poulter NS; Styles IB
    Bioinformatics; 2020 Mar; 36(5):1614-1621. PubMed ID: 31626286
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Topological Data Analysis for Multivariate Time Series Data.
    El-Yaagoubi AB; Chung MK; Ombao H
    Entropy (Basel); 2023 Nov; 25(11):. PubMed ID: 37998201
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TTK is Getting MPI-Ready.
    Le Guillou E; Will M; Guillou P; Lukasczyk J; Fortin P; Garth C; Tierny J
    IEEE Trans Vis Comput Graph; 2024 Aug; 30(8):5875-5892. PubMed ID: 38630564
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evaluation of Event-Based Algorithms for Optical Flow with Ground-Truth from Inertial Measurement Sensor.
    Rueckauer B; Delbruck T
    Front Neurosci; 2016; 10():176. PubMed ID: 27199639
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Persistence Cycles for Visual Exploration of Persistent Homology.
    Iuricich F
    IEEE Trans Vis Comput Graph; 2022 Dec; 28(12):4966-4979. PubMed ID: 34495835
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The OpenKIM processing pipeline: A cloud-based automatic material property computation engine.
    Karls DS; Bierbaum M; Alemi AA; Elliott RS; Sethna JP; Tadmor EB
    J Chem Phys; 2020 Aug; 153(6):064104. PubMed ID: 35287439
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Multiresolution persistent homology for excessively large biomolecular datasets.
    Xia K; Zhao Z; Wei GW
    J Chem Phys; 2015 Oct; 143(13):134103. PubMed ID: 26450288
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The robustness of persistent homology of brain networks to data acquisition-related non-neural variability in resting state fMRI.
    Kumar S; Shovon AR; Deshpande G
    Hum Brain Mapp; 2023 Sep; 44(13):4637-4651. PubMed ID: 37449464
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A Primer on Persistent Homology of Finite Metric Spaces.
    Mémoli F; Singhal K
    Bull Math Biol; 2019 Jul; 81(7):2074-2116. PubMed ID: 31140053
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Time-varying graph representation learning via higher-order skip-gram with negative sampling.
    Piaggesi S; Panisson A
    EPJ Data Sci; 2022; 11(1):33. PubMed ID: 35668814
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Benchmarking Spike-Based Visual Recognition: A Dataset and Evaluation.
    Liu Q; Pineda-García G; Stromatias E; Serrano-Gotarredona T; Furber SB
    Front Neurosci; 2016; 10():496. PubMed ID: 27853419
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Gene Coexpression Network Comparison via Persistent Homology.
    Duman AN; Pirim H
    Int J Genomics; 2018; 2018():7329576. PubMed ID: 30327773
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.