These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

355 related articles for article (PubMed ID: 32042190)

  • 1. Measurement of atom resolvability in cryo-EM maps with Q-scores.
    Pintilie G; Zhang K; Su Z; Li S; Schmid MF; Chiu W
    Nat Methods; 2020 Mar; 17(3):328-334. PubMed ID: 32042190
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Validation, analysis and annotation of cryo-EM structures.
    Pintilie G; Chiu W
    Acta Crystallogr D Struct Biol; 2021 Sep; 77(Pt 9):1142-1152. PubMed ID: 34473085
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Assessment of structural features in Cryo-EM density maps using SSE and side chain Z-scores.
    Pintilie G; Chiu W
    J Struct Biol; 2018 Dec; 204(3):564-571. PubMed ID: 30144506
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Density modification of cryo-EM maps.
    Terwilliger TC; Sobolev OV; Afonine PV; Adams PD; Read RJ
    Acta Crystallogr D Struct Biol; 2020 Oct; 76(Pt 10):912-925. PubMed ID: 33021493
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Identification of Mg
    Wang J; Natchiar SK; Moore PB; Klaholz BP
    Acta Crystallogr D Struct Biol; 2021 Apr; 77(Pt 4):534-539. PubMed ID: 33825713
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Single-particle cryo-EM at atomic resolution.
    Nakane T; Kotecha A; Sente A; McMullan G; Masiulis S; Brown PMGE; Grigoras IT; Malinauskaite L; Malinauskas T; Miehling J; Uchański T; Yu L; Karia D; Pechnikova EV; de Jong E; Keizer J; Bischoff M; McCormack J; Tiemeijer P; Hardwick SW; Chirgadze DY; Murshudov G; Aricescu AR; Scheres SHW
    Nature; 2020 Nov; 587(7832):152-156. PubMed ID: 33087931
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Atomic-resolution protein structure determination by cryo-EM.
    Yip KM; Fischer N; Paknia E; Chari A; Stark H
    Nature; 2020 Nov; 587(7832):157-161. PubMed ID: 33087927
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Improvement of cryo-EM maps by density modification.
    Terwilliger TC; Ludtke SJ; Read RJ; Adams PD; Afonine PV
    Nat Methods; 2020 Sep; 17(9):923-927. PubMed ID: 32807957
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Current approaches for the fitting and refinement of atomic models into cryo-EM maps using CCP-EM.
    Nicholls RA; Tykac M; Kovalevskiy O; Murshudov GN
    Acta Crystallogr D Struct Biol; 2018 Jun; 74(Pt 6):492-505. PubMed ID: 29872001
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The accuracy of protein models automatically built into cryo-EM maps with ARP/wARP.
    Chojnowski G; Sobolev E; Heuser P; Lamzin VS
    Acta Crystallogr D Struct Biol; 2021 Feb; 77(Pt 2):142-150. PubMed ID: 33559604
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Fast and automated protein-DNA/RNA macromolecular complex modeling from cryo-EM maps.
    Nakamura A; Meng H; Zhao M; Wang F; Hou J; Cao R; Si D
    Brief Bioinform; 2023 Mar; 24(2):. PubMed ID: 36682003
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A fragment based method for modeling of protein segments into cryo-EM density maps.
    Ismer J; Rose AS; Tiemann JKS; Hildebrand PW
    BMC Bioinformatics; 2017 Nov; 18(1):475. PubMed ID: 29132296
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Accurate model annotation of a near-atomic resolution cryo-EM map.
    Hryc CF; Chen DH; Afonine PV; Jakana J; Wang Z; Haase-Pettingell C; Jiang W; Adams PD; King JA; Schmid MF; Chiu W
    Proc Natl Acad Sci U S A; 2017 Mar; 114(12):3103-3108. PubMed ID: 28270620
    [TBL] [Abstract][Full Text] [Related]  

  • 14. High-Resolution Cryo-EM Maps and Models: A Crystallographer's Perspective.
    Wlodawer A; Li M; Dauter Z
    Structure; 2017 Oct; 25(10):1589-1597.e1. PubMed ID: 28867613
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparing Cryo-EM Reconstructions and Validating Atomic Model Fit Using Difference Maps.
    Joseph AP; Lagerstedt I; Jakobi A; Burnley T; Patwardhan A; Topf M; Winn M
    J Chem Inf Model; 2020 May; 60(5):2552-2560. PubMed ID: 32043355
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Detecting protein and DNA/RNA structures in cryo-EM maps of intermediate resolution using deep learning.
    Wang X; Alnabati E; Aderinwale TW; Maddhuri Venkata Subramaniya SR; Terashi G; Kihara D
    Nat Commun; 2021 Apr; 12(1):2302. PubMed ID: 33863902
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DeepQs: Local quality assessment of cryo-EM density map by deep learning map-model fit score.
    Feng MF; Chen YX; Shen HB
    J Struct Biol; 2024 Mar; 216(1):108059. PubMed ID: 38160703
    [TBL] [Abstract][Full Text] [Related]  

  • 18. 2.7 Å cryo-EM structure of vitrified M. musculus H-chain apoferritin from a compact 200 keV cryo-microscope.
    Hamdi F; Tüting C; Semchonok DA; Visscher KM; Kyrilis FL; Meister A; Skalidis I; Schmidt L; Parthier C; Stubbs MT; Kastritis PL
    PLoS One; 2020; 15(5):e0232540. PubMed ID: 32374767
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Neural representations of cryo-EM maps and a graph-based interpretation.
    Ranno N; Si D
    BMC Bioinformatics; 2022 Sep; 23(Suppl 3):397. PubMed ID: 36171544
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Residue-wise local quality estimation for protein models from cryo-EM maps.
    Terashi G; Wang X; Maddhuri Venkata Subramaniya SR; Tesmer JJG; Kihara D
    Nat Methods; 2022 Sep; 19(9):1116-1125. PubMed ID: 35953671
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.