101 related articles for article (PubMed ID: 32049321)
1. Occupancy spectrum distribution: application for coalescence simulation with generic mergers.
Becheler A; Knowles LL
Bioinformatics; 2020 May; 36(10):3279-3280. PubMed ID: 32049321
[TBL] [Abstract][Full Text] [Related]
2. The Quetzal Coalescence template library: A C++ programmers resource for integrating distributional, demographic and coalescent models.
Becheler A; Coron C; Dupas S
Mol Ecol Resour; 2019 May; 19(3):788-793. PubMed ID: 30637945
[TBL] [Abstract][Full Text] [Related]
3. An algorithm for computing the gene tree probability under the multispecies coalescent and its application in the inference of population tree.
Wu Y
Bioinformatics; 2016 Jun; 32(12):i225-i233. PubMed ID: 27307621
[TBL] [Abstract][Full Text] [Related]
4. Asymptotic distributions of coalescence times and ancestral lineage numbers for populations with temporally varying size.
Chen H; Chen K
Genetics; 2013 Jul; 194(3):721-36. PubMed ID: 23666939
[TBL] [Abstract][Full Text] [Related]
5. An efficient Bayesian inference framework for coalescent-based nonparametric phylodynamics.
Lan S; Palacios JA; Karcher M; Minin VN; Shahbaba B
Bioinformatics; 2015 Oct; 31(20):3282-9. PubMed ID: 26093147
[TBL] [Abstract][Full Text] [Related]
6. The Wright-Fisher site frequency spectrum as a perturbation of the coalescent's.
Melfi A; Viswanath D
Theor Popul Biol; 2018 Dec; 124():81-92. PubMed ID: 30308178
[TBL] [Abstract][Full Text] [Related]
7. Single and simultaneous binary mergers in Wright-Fisher genealogies.
Melfi A; Viswanath D
Theor Popul Biol; 2018 May; 121():60-71. PubMed ID: 29655651
[TBL] [Abstract][Full Text] [Related]
8. Cosi2: an efficient simulator of exact and approximate coalescent with selection.
Shlyakhter I; Sabeti PC; Schaffner SF
Bioinformatics; 2014 Dec; 30(23):3427-9. PubMed ID: 25150247
[TBL] [Abstract][Full Text] [Related]
9. Multiple merger gene genealogies in two species: Monophyly, paraphyly, and polyphyly for two examples of Lambda coalescents.
Eldon B; Degnan JH
Theor Popul Biol; 2012 Sep; 82(2):117-30. PubMed ID: 22613063
[TBL] [Abstract][Full Text] [Related]
10. Inference of population admixture network from local gene genealogies: a coalescent-based maximum likelihood approach.
Wu Y
Bioinformatics; 2020 Jul; 36(Suppl_1):i326-i334. PubMed ID: 32657366
[TBL] [Abstract][Full Text] [Related]
11. Bursts of coalescence within population pedigrees whenever big families occur.
Diamantidis D; Fan WL; Birkner M; Wakeley J
Genetics; 2024 May; 227(1):. PubMed ID: 38408329
[TBL] [Abstract][Full Text] [Related]
12. Coalescent simulation in continuous space.
Kelleher J; Barton NH; Etheridge AM
Bioinformatics; 2013 Apr; 29(7):955-6. PubMed ID: 23391497
[TBL] [Abstract][Full Text] [Related]
13. Exact coalescent for the Wright-Fisher model.
Fu YX
Theor Popul Biol; 2006 Jun; 69(4):385-94. PubMed ID: 16426654
[TBL] [Abstract][Full Text] [Related]
14. MetaSMC: a coalescent-based shotgun sequence simulator for evolving microbial populations.
Liao KH; Hon WK; Tang CY; Hsieh WP
Bioinformatics; 2019 May; 35(10):1677-1685. PubMed ID: 30321266
[TBL] [Abstract][Full Text] [Related]
15. Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees.
Zhu S; Degnan JH; Goldstien SJ; Eldon B
BMC Bioinformatics; 2015 Sep; 16():292. PubMed ID: 26373308
[TBL] [Abstract][Full Text] [Related]
16. MASCOT: parameter and state inference under the marginal structured coalescent approximation.
Müller NF; Rasmussen D; Stadler T
Bioinformatics; 2018 Nov; 34(22):3843-3848. PubMed ID: 29790921
[TBL] [Abstract][Full Text] [Related]
17. Genealogies of rapidly adapting populations.
Neher RA; Hallatschek O
Proc Natl Acad Sci U S A; 2013 Jan; 110(2):437-42. PubMed ID: 23269838
[TBL] [Abstract][Full Text] [Related]
18. ARGON: fast, whole-genome simulation of the discrete time Wright-fisher process.
Palamara PF
Bioinformatics; 2016 Oct; 32(19):3032-4. PubMed ID: 27312410
[TBL] [Abstract][Full Text] [Related]
19. Markovian approximation to the finite loci coalescent with recombination along multiple sequences.
Hobolth A; Jensen JL
Theor Popul Biol; 2014 Dec; 98():48-58. PubMed ID: 24486389
[TBL] [Abstract][Full Text] [Related]
20. A new method for modeling coalescent processes with recombination.
Wang Y; Zhou Y; Li L; Chen X; Liu Y; Ma ZM; Xu S
BMC Bioinformatics; 2014 Aug; 15(1):273. PubMed ID: 25113665
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]