These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

304 related articles for article (PubMed ID: 32118177)

  • 1. Structural Patterns and Stabilities of Hydrogen-Bonded Pairs Involving Ribonucleotide Bases and Arginine, Glutamic Acid, or Glutamine Residues of Proteins from Quantum Mechanical Calculations.
    Kagra D; Prabhakar PS; Sharma KD; Sharma P
    ACS Omega; 2020 Feb; 5(7):3612-3623. PubMed ID: 32118177
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A quantum chemical view of the interaction of RNA nucleobases and base pairs with the side chains of polar amino acids.
    Ohri A; P Seelam P; Sharma P
    J Biomol Struct Dyn; 2021 Sep; 39(15):5411-5426. PubMed ID: 32662328
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Intermolecular CH···O/N H-bonds in the biologically important pairs of natural nucleobases: a thorough quantum-chemical study.
    Brovarets' OO; Yurenko YP; Hovorun DM
    J Biomol Struct Dyn; 2014; 32(6):993-1022. PubMed ID: 23730732
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Trans Hoogsteen/sugar edge base pairing in RNA. Structures, energies, and stabilities from quantum chemical calculations.
    Mládek A; Sharma P; Mitra A; Bhattacharyya D; Sponer J; Sponer JE
    J Phys Chem B; 2009 Feb; 113(6):1743-55. PubMed ID: 19152254
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Ab initio quantum mechanics analysis of imidazole C-H...O water hydrogen bonding and a molecular mechanics forcefield correction.
    Ornstein RL; Zheng YJ
    J Biomol Struct Dyn; 1997 Jun; 14(6):657-65. PubMed ID: 9195335
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Quantum chemical studies of structures and binding in noncanonical RNA base pairs: the trans Watson-Crick:Watson-Crick family.
    Sharma P; Mitra A; Sharma S; Singh H; Bhattacharyya D
    J Biomol Struct Dyn; 2008 Jun; 25(6):709-32. PubMed ID: 18399704
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Statistical analysis of atomic contacts at RNA-protein interfaces.
    Treger M; Westhof E
    J Mol Recognit; 2001; 14(4):199-214. PubMed ID: 11500966
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The significant role of the intermolecular CH⋯O/N hydrogen bonds in governing the biologically important pairs of the DNA and RNA modified bases: a comprehensive theoretical investigation.
    Brovarets' OO; Yurenko YP; Hovorun DM
    J Biomol Struct Dyn; 2015; 33(8):1624-52. PubMed ID: 25350312
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Can modified DNA base pairs with chalcogen bonding expand the genetic alphabet? A combined quantum chemical and molecular dynamics simulation study.
    Sharma KD; Kathuria P; Wetmore SD; Sharma P
    Phys Chem Chem Phys; 2020 Nov; 22(41):23754-23765. PubMed ID: 33063082
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Deterministic features of side-chain main-chain hydrogen bonds in globular protein structures.
    Eswar N; Ramakrishnan C
    Protein Eng; 2000 Apr; 13(4):227-38. PubMed ID: 10810153
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The orientation of N-H...O=C and N-H...N hydrogen bonds in biological systems: how good is a point charge as a model for a hydrogen bonding atom?
    Apaya RP; Bondí M; Price SL
    J Comput Aided Mol Des; 1997 Sep; 11(5):479-90. PubMed ID: 9385551
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Recognition of nucleic acid bases and base-pairs by hydrogen bonding to amino acid side-chains.
    Cheng AC; Chen WW; Fuhrmann CN; Frankel AD
    J Mol Biol; 2003 Apr; 327(4):781-96. PubMed ID: 12654263
    [TBL] [Abstract][Full Text] [Related]  

  • 13. On the role of the cis Hoogsteen:sugar-edge family of base pairs in platforms and triplets-quantum chemical insights into RNA structural biology.
    Sharma P; Sponer JE; Sponer J; Sharma S; Bhattacharyya D; Mitra A
    J Phys Chem B; 2010 Mar; 114(9):3307-20. PubMed ID: 20163171
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Imidazole Nitrogens of Two Histidine Residues Participating in N-H···N Hydrogen Bonds in Protein Structures: Structural Bioinformatics Approach Combined with Quantum Chemical Calculations.
    Iyer AH; Krishna Deepak RNV; Sankararamakrishnan R
    J Phys Chem B; 2018 Jan; 122(3):1205-1212. PubMed ID: 29278913
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Role of hydrogen bonds in protein-DNA recognition: effect of nonplanar amino groups.
    Mukherjee S; Majumdar S; Bhattacharyya D
    J Phys Chem B; 2005 May; 109(20):10484-92. PubMed ID: 16852270
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Strength of Calpha-H...O=C hydrogen bonds in transmembrane proteins.
    Park H; Yoon J; Seok C
    J Phys Chem B; 2008 Jan; 112(3):1041-8. PubMed ID: 18154287
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A mutational analysis of binding interactions in an antigen-antibody protein-protein complex.
    Dall'Acqua W; Goldman ER; Lin W; Teng C; Tsuchiya D; Li H; Ysern X; Braden BC; Li Y; Smith-Gill SJ; Mariuzza RA
    Biochemistry; 1998 Jun; 37(22):7981-91. PubMed ID: 9609690
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Toward an Expanded Genome: Structural and Computational Characterization of an Artificially Expanded Genetic Information System.
    Richards NGJ; Georgiadis MM
    Acc Chem Res; 2017 Jun; 50(6):1375-1382. PubMed ID: 28594167
    [TBL] [Abstract][Full Text] [Related]  

  • 19. N-H···N Hydrogen Bonds Involving Histidine Imidazole Nitrogen Atoms: A New Structural Role for Histidine Residues in Proteins.
    Krishna Deepak RN; Sankararamakrishnan R
    Biochemistry; 2016 Jul; 55(27):3774-83. PubMed ID: 27305350
    [TBL] [Abstract][Full Text] [Related]  

  • 20. On the importance and origin of aromatic interactions in chemistry and biodisciplines.
    Riley KE; Hobza P
    Acc Chem Res; 2013 Apr; 46(4):927-36. PubMed ID: 22872015
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.