BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

187 related articles for article (PubMed ID: 32119016)

  • 1. Molecular dynamics simulations reveal distinct differences in conformational dynamics and thermodynamics between the unliganded and CD4-bound states of HIV-1 gp120.
    Li Y; Deng L; Liang J; Dong GH; Xia YL; Fu YX; Liu SQ
    Phys Chem Chem Phys; 2020 Mar; 22(10):5548-5560. PubMed ID: 32119016
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Effects of CD4 Binding on Conformational Dynamics, Molecular Motions, and Thermodynamics of HIV-1 gp120.
    Li Y; Deng L; Yang LQ; Sang P; Liu SQ
    Int J Mol Sci; 2019 Jan; 20(2):. PubMed ID: 30634692
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CD4-binding obstacles in conformational transitions and allosteric communications of HIV gp120.
    Li Y; Guo YC; Zhang XL; Deng L; Sang P; Yang LQ; Liu SQ
    Biochim Biophys Acta Biomembr; 2020 Jun; 1862(6):183217. PubMed ID: 32061646
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Insight derived from molecular dynamics simulations into molecular motions, thermodynamics and kinetics of HIV-1 gp120.
    Sang P; Yang LQ; Ji XL; Fu YX; Liu SQ
    PLoS One; 2014; 9(8):e104714. PubMed ID: 25105502
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Local conformational stability of HIV-1 gp120 in unliganded and CD4-bound states as defined by amide hydrogen/deuterium exchange.
    Kong L; Huang CC; Coales SJ; Molnar KS; Skinner J; Hamuro Y; Kwong PD
    J Virol; 2010 Oct; 84(19):10311-21. PubMed ID: 20660185
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops.
    Kwon YD; Finzi A; Wu X; Dogo-Isonagie C; Lee LK; Moore LR; Schmidt SD; Stuckey J; Yang Y; Zhou T; Zhu J; Vicic DA; Debnath AK; Shapiro L; Bewley CA; Mascola JR; Sodroski JG; Kwong PD
    Proc Natl Acad Sci U S A; 2012 Apr; 109(15):5663-8. PubMed ID: 22451932
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Insights into the molecular mechanism underlying CD4-dependency and neutralization sensitivity of HIV-1: a comparative molecular dynamics study on gp120s from isolates with different phenotypes.
    Li Y; Deng L; Ai SM; Sang P; Yang J; Xia YL; Zhang ZB; Fu YX; Liu SQ
    RSC Adv; 2018 Apr; 8(26):14355-14368. PubMed ID: 35540760
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Range of CD4-Bound Conformations of HIV-1 gp120, as Defined Using Conditional CD4-Induced Antibodies.
    Kaplan G; Roitburd-Berman A; Lewis GK; Gershoni JM
    J Virol; 2016 May; 90(9):4481-4493. PubMed ID: 26889042
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Solution structure, conformational dynamics, and CD4-induced activation in full-length, glycosylated, monomeric HIV gp120.
    Guttman M; Kahn M; Garcia NK; Hu SL; Lee KK
    J Virol; 2012 Aug; 86(16):8750-64. PubMed ID: 22674993
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Molecular motions of human HIV-1 gp120 envelope glycoproteins.
    Liu SQ; Liu SX; Fu YX
    J Mol Model; 2008 Sep; 14(9):857-70. PubMed ID: 18594881
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Molecular motions in HIV-1 gp120 mutants reveal their preferences for different conformations.
    Liu SQ; Liu CQ; Fu YX
    J Mol Graph Model; 2007 Jul; 26(1):306-18. PubMed ID: 17227719
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop.
    Wang H; Cohen AA; Galimidi RP; Gristick HB; Jensen GJ; Bjorkman PJ
    Proc Natl Acad Sci U S A; 2016 Nov; 113(46):E7151-E7158. PubMed ID: 27799557
    [TBL] [Abstract][Full Text] [Related]  

  • 13. NMR observation of HIV-1 gp120 conformational flexibility resulting from V3 truncation.
    Moseri A; Schnur E; Noah E; Zherdev Y; Kessler N; Singhal Sinha E; Abayev M; Naider F; Scherf T; Anglister J
    FEBS J; 2014 Jul; 281(13):3019-31. PubMed ID: 24819826
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Residues in the gp41 Ectodomain Regulate HIV-1 Envelope Glycoprotein Conformational Transitions Induced by gp120-Directed Inhibitors.
    Pacheco B; Alsahafi N; Debbeche O; Prévost J; Ding S; Chapleau JP; Herschhorn A; Madani N; Princiotto A; Melillo B; Gu C; Zeng X; Mao Y; Smith AB; Sodroski J; Finzi A
    J Virol; 2017 Mar; 91(5):. PubMed ID: 28003492
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Topological layers in the HIV-1 gp120 inner domain regulate gp41 interaction and CD4-triggered conformational transitions.
    Finzi A; Xiang SH; Pacheco B; Wang L; Haight J; Kassa A; Danek B; Pancera M; Kwong PD; Sodroski J
    Mol Cell; 2010 Mar; 37(5):656-67. PubMed ID: 20227370
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible.
    Pan Y; Ma B; Nussinov R
    J Mol Biol; 2005 Jul; 350(3):514-27. PubMed ID: 15946678
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The highly conserved layer-3 component of the HIV-1 gp120 inner domain is critical for CD4-required conformational transitions.
    Désormeaux A; Coutu M; Medjahed H; Pacheco B; Herschhorn A; Gu C; Xiang SH; Mao Y; Sodroski J; Finzi A
    J Virol; 2013 Mar; 87(5):2549-62. PubMed ID: 23255784
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Energetics of the HIV gp120-CD4 binding reaction.
    Myszka DG; Sweet RW; Hensley P; Brigham-Burke M; Kwong PD; Hendrickson WA; Wyatt R; Sodroski J; Doyle ML
    Proc Natl Acad Sci U S A; 2000 Aug; 97(16):9026-31. PubMed ID: 10922058
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Understanding of the bridging sheet formation of HIV-1 glycoprotein gp120.
    Da LT; Quan JM; Wu YD
    J Phys Chem B; 2009 Oct; 113(43):14536-43. PubMed ID: 19813706
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structure of Simian Immunodeficiency Virus Envelope Spikes Bound with CD4 and Monoclonal Antibody 36D5.
    Hu G; Liu J; Roux KH; Taylor KA
    J Virol; 2017 Aug; 91(16):. PubMed ID: 28539445
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.