BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

109 related articles for article (PubMed ID: 32119071)

  • 1. ProCaff: protein-carbohydrate complex binding affinity database.
    Siva Shanmugam NR; Jino Blessy J; Veluraja K; Michael Gromiha M
    Bioinformatics; 2020 Jun; 36(11):3615-3617. PubMed ID: 32119071
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PROXiMATE: a database of mutant protein-protein complex thermodynamics and kinetics.
    Jemimah S; Yugandhar K; Michael Gromiha M
    Bioinformatics; 2017 Sep; 33(17):2787-2788. PubMed ID: 28498885
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CarbDisMut: database on neutral and disease-causing mutations in human carbohydrate-binding proteins.
    Shanmugam NRS; Kulandaisamy A; Veluraja K; Gromiha MM
    Glycobiology; 2024 Apr; 34(4):. PubMed ID: 38335248
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MutHTP: mutations in human transmembrane proteins.
    Kulandaisamy A; Binny Priya S; Sakthivel R; Tarnovskaya S; Bizin I; Hönigschmid P; Frishman D; Gromiha MM
    Bioinformatics; 2018 Jul; 34(13):2325-2326. PubMed ID: 29401218
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Prediction of protein-carbohydrate complex binding affinity using structural features.
    Siva Shanmugam NR; Jino Blessy J; Veluraja K; Gromiha MM
    Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33313775
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ProNAB: database for binding affinities of protein-nucleic acid complexes and their mutants.
    Harini K; Srivastava A; Kulandaisamy A; Gromiha MM
    Nucleic Acids Res; 2022 Jan; 50(D1):D1528-D1534. PubMed ID: 34606614
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MPAD: A Database for Binding Affinity of Membrane Protein-protein Complexes and their Mutants.
    Ridha F; Kulandaisamy A; Michael Gromiha M
    J Mol Biol; 2023 Jul; 435(14):167870. PubMed ID: 36309134
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MPTherm: database for membrane protein thermodynamics for understanding folding and stability.
    Kulandaisamy A; Sakthivel R; Gromiha MM
    Brief Bioinform; 2021 Mar; 22(2):2119-2125. PubMed ID: 32337573
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years.
    Nikam R; Kulandaisamy A; Harini K; Sharma D; Gromiha MM
    Nucleic Acids Res; 2021 Jan; 49(D1):D420-D424. PubMed ID: 33196841
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies.
    Rawat P; Sharma D; Prabakaran R; Ridha F; Mohkhedkar M; Janakiraman V; Gromiha MM
    Bioinformatics; 2022 Aug; 38(16):4051-4052. PubMed ID: 35771624
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PCA-MutPred: Prediction of Binding Free Energy Change Upon Missense Mutation in Protein-carbohydrate Complexes.
    Siva Shanmugam NR; Veluraja K; Michael Gromiha M
    J Mol Biol; 2022 Jun; 434(11):167526. PubMed ID: 35662456
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ProAffiMuSeq: sequence-based method to predict the binding free energy change of protein-protein complexes upon mutation using functional classification.
    Jemimah S; Sekijima M; Gromiha MM
    Bioinformatics; 2020 Mar; 36(6):1725-1730. PubMed ID: 31713585
    [TBL] [Abstract][Full Text] [Related]  

  • 13. R-SIM: A Database of Binding Affinities for RNA-small Molecule Interactions.
    Ramaswamy Krishnan S; Roy A; Michael Gromiha M
    J Mol Biol; 2023 Jul; 435(14):167914. PubMed ID: 36495921
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The new protein topology graph library web server.
    Schäfer T; Scheck A; Bruneß D; May P; Koch I
    Bioinformatics; 2016 Feb; 32(3):474-6. PubMed ID: 26446136
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Illustrative Tutorials for ProThermDB: Thermodynamic Database for Proteins and Mutants.
    Kulandaisamy A; Nikam R; Harini K; Sharma D; Gromiha MM
    Curr Protoc; 2021 Nov; 1(11):e306. PubMed ID: 34826364
    [TBL] [Abstract][Full Text] [Related]  

  • 16. DeepBSRPred: deep learning-based binding site residue prediction for proteins.
    Nikam R; Yugandhar K; Gromiha MM
    Amino Acids; 2023 Oct; 55(10):1305-1316. PubMed ID: 36574037
    [TBL] [Abstract][Full Text] [Related]  

  • 17. 3DPatch: fast 3D structure visualization with residue conservation.
    Jakubec D; Vondrášek J; Finn RD
    Bioinformatics; 2019 Jan; 35(2):332-334. PubMed ID: 29931189
    [TBL] [Abstract][Full Text] [Related]  

  • 18. DeepPPAPredMut: deep ensemble method for predicting the binding affinity change in protein-protein complexes upon mutation.
    Nikam R; Jemimah S; Gromiha MM
    Bioinformatics; 2024 May; 40(5):. PubMed ID: 38718170
    [TBL] [Abstract][Full Text] [Related]  

  • 19. pStab: prediction of stable mutants, unfolding curves, stability maps and protein electrostatic frustration.
    Gopi S; Devanshu D; Krishna P; Naganathan AN
    Bioinformatics; 2018 Mar; 34(5):875-877. PubMed ID: 29092002
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PDB-wide collection of binding data: current status of the PDBbind database.
    Liu Z; Li Y; Han L; Li J; Liu J; Zhao Z; Nie W; Liu Y; Wang R
    Bioinformatics; 2015 Feb; 31(3):405-12. PubMed ID: 25301850
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.