These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
24. A standard-enabled workflow for synthetic biology. Myers CJ; Beal J; Gorochowski TE; Kuwahara H; Madsen C; McLaughlin JA; Mısırlı G; Nguyen T; Oberortner E; Samineni M; Wipat A; Zhang M; Zundel Z Biochem Soc Trans; 2017 Jun; 45(3):793-803. PubMed ID: 28620041 [TBL] [Abstract][Full Text] [Related]
25. Sharing Structure and Function in Biological Design with SBOL 2.0. Roehner N; Beal J; Clancy K; Bartley B; Misirli G; Grünberg R; Oberortner E; Pocock M; Bissell M; Madsen C; Nguyen T; Zhang M; Zhang Z; Zundel Z; Densmore D; Gennari JH; Wipat A; Sauro HM; Myers CJ ACS Synth Biol; 2016 Jun; 5(6):498-506. PubMed ID: 27111421 [TBL] [Abstract][Full Text] [Related]
26. Capturing Multicellular System Designs Using Synthetic Biology Open Language (SBOL). Brown B; Bartley B; Beal J; Bird JE; Goñi-Moreno Á; McLaughlin JA; Mısırlı G; Roehner N; Skelton DJ; Poh CL; Ofiteru ID; James K; Wipat A ACS Synth Biol; 2020 Sep; 9(9):2410-2417. PubMed ID: 32786354 [TBL] [Abstract][Full Text] [Related]
27. SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology. McLaughlin JA; Myers CJ; Zundel Z; Mısırlı G; Zhang M; Ofiteru ID; Goñi-Moreno A; Wipat A ACS Synth Biol; 2018 Feb; 7(2):682-688. PubMed ID: 29316788 [TBL] [Abstract][Full Text] [Related]
28. Communicating Structure and Function in Synthetic Biology Diagrams. Beal J; Nguyen T; Gorochowski TE; Goñi-Moreno A; Scott-Brown J; McLaughlin JA; Madsen C; Aleritsch B; Bartley B; Bhakta S; Bissell M; Castillo Hair S; Clancy K; Luna A; Le Novère N; Palchick Z; Pocock M; Sauro H; Sexton JT; Tabor JJ; Voigt CA; Zundel Z; Myers C; Wipat A ACS Synth Biol; 2019 Aug; 8(8):1818-1825. PubMed ID: 31348656 [TBL] [Abstract][Full Text] [Related]
29. Generating Systems Biology Markup Language Models from the Synthetic Biology Open Language. Roehner N; Zhang Z; Nguyen T; Myers CJ ACS Synth Biol; 2015 Aug; 4(8):873-9. PubMed ID: 25822671 [TBL] [Abstract][Full Text] [Related]
30. The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering. McLaughlin JA; Beal J; Mısırlı G; Grünberg R; Bartley BA; Scott-Brown J; Vaidyanathan P; Fontanarrosa P; Oberortner E; Wipat A; Gorochowski TE; Myers CJ Front Bioeng Biotechnol; 2020; 8():1009. PubMed ID: 33015004 [TBL] [Abstract][Full Text] [Related]
31. A Computational Workflow for the Automated Generation of Models of Genetic Designs. Misirli G; Nguyen T; McLaughlin JA; Vaidyanathan P; Jones TS; Densmore D; Myers C; Wipat A ACS Synth Biol; 2019 Jul; 8(7):1548-1559. PubMed ID: 29782151 [TBL] [Abstract][Full Text] [Related]
32. SBOLDesigner 2: An Intuitive Tool for Structural Genetic Design. Zhang M; McLaughlin JA; Wipat A; Myers CJ ACS Synth Biol; 2017 Jul; 6(7):1150-1160. PubMed ID: 28441476 [TBL] [Abstract][Full Text] [Related]
33. SBOLme: a Repository of SBOL Parts for Metabolic Engineering. Kuwahara H; Cui X; Umarov R; Grünberg R; Myers CJ; Gao X ACS Synth Biol; 2017 Apr; 6(4):732-736. PubMed ID: 28076956 [TBL] [Abstract][Full Text] [Related]
34. A Validator and Converter for the Synthetic Biology Open Language. Zundel Z; Samineni M; Zhang Z; Myers CJ ACS Synth Biol; 2017 Jul; 6(7):1161-1168. PubMed ID: 28033703 [TBL] [Abstract][Full Text] [Related]
35. Curation Principles Derived from the Analysis of the SBOL iGEM Data Set. Mante J; Roehner N; Keating K; McLaughlin JA; Young E; Beal J; Myers CJ ACS Synth Biol; 2021 Oct; 10(10):2592-2606. PubMed ID: 34546707 [TBL] [Abstract][Full Text] [Related]
36. Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019. Schreiber F; Sommer B; Bader GD; Gleeson P; Golebiewski M; Hucka M; Keating SM; König M; Myers C; Nickerson D; Waltemath D J Integr Bioinform; 2019 Jul; 16(2):. PubMed ID: 31301675 [TBL] [Abstract][Full Text] [Related]
37. SynBio2Easy-a biologist-friendly tool for batch operations on SBOL designs with Excel inputs. Zieliński T; Hay J; Romanowski A; Nenninger A; McCormick A; Millar AJ Synth Biol (Oxf); 2021; 7(1):ysac002. PubMed ID: 35350192 [TBL] [Abstract][Full Text] [Related]
38. Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022. König M; Gleeson P; Golebiewski M; Gorochowski TE; Hucka M; Keating SM; Myers CJ; Nickerson DP; Sommer B; Waltemath D; Schreiber F J Integr Bioinform; 2023 Mar; 20(1):. PubMed ID: 36989443 [TBL] [Abstract][Full Text] [Related]