These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

130 related articles for article (PubMed ID: 32131723)

  • 21. NeatFreq: reference-free data reduction and coverage normalization for De Novo sequence assembly.
    McCorrison JM; Venepally P; Singh I; Fouts DE; Lasken RS; Methé BA
    BMC Bioinformatics; 2014 Nov; 15(1):357. PubMed ID: 25407910
    [TBL] [Abstract][Full Text] [Related]  

  • 22. AlignGraph2: similar genome-assisted reassembly pipeline for PacBio long reads.
    Huang S; He X; Wang G; Bao E
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33621981
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Calling known variants and identifying new variants while rapidly aligning sequence data.
    VanRaden PM; Bickhart DM; O'Connell JR
    J Dairy Sci; 2019 Apr; 102(4):3216-3229. PubMed ID: 30772032
    [TBL] [Abstract][Full Text] [Related]  

  • 24. SinoDuplex: An Improved Duplex Sequencing Approach to Detect Low-frequency Variants in Plasma cfDNA Samples.
    Ren Y; Zhang Y; Wang D; Liu F; Fu Y; Xiang S; Su L; Li J; Dai H; Huang B
    Genomics Proteomics Bioinformatics; 2020 Feb; 18(1):81-90. PubMed ID: 32428603
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Blue: correcting sequencing errors using consensus and context.
    Greenfield P; Duesing K; Papanicolaou A; Bauer DC
    Bioinformatics; 2014 Oct; 30(19):2723-32. PubMed ID: 24919879
    [TBL] [Abstract][Full Text] [Related]  

  • 26. MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction.
    Lang J
    PLoS One; 2022; 17(5):e0267066. PubMed ID: 35594250
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Precise detection of de novo single nucleotide variants in human genomes.
    Gómez-Romero L; Palacios-Flores K; Reyes J; García D; Boege M; Dávila G; Flores M; Schatz MC; Palacios R
    Proc Natl Acad Sci U S A; 2018 May; 115(21):5516-5521. PubMed ID: 29735690
    [TBL] [Abstract][Full Text] [Related]  

  • 28. MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data.
    Wang Z; Cui Y; Peng S; Liao X; Yu Y
    Comput Biol Chem; 2022 Aug; 99():107735. PubMed ID: 35850048
    [TBL] [Abstract][Full Text] [Related]  

  • 29. ELECTOR: evaluator for long reads correction methods.
    Marchet C; Morisse P; Lecompte L; Lefebvre A; Lecroq T; Peterlongo P; Limasset A
    NAR Genom Bioinform; 2020 Mar; 2(1):lqz015. PubMed ID: 33575566
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Sequencing barcode construction and identification methods based on block error-correction codes.
    Chen W; Wang L; Han M; Han C; Li B
    Sci China Life Sci; 2020 Oct; 63(10):1580-1592. PubMed ID: 32303959
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Accurate self-correction of errors in long reads using de Bruijn graphs.
    Salmela L; Walve R; Rivals E; Ukkonen E
    Bioinformatics; 2017 Mar; 33(6):799-806. PubMed ID: 27273673
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Alignment-free clustering of UMI tagged DNA molecules.
    Orabi B; Erhan E; McConeghy B; Volik SV; Le Bihan S; Bell R; Collins CC; Chauve C; Hach F
    Bioinformatics; 2019 Jun; 35(11):1829-1836. PubMed ID: 30351359
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs.
    Limasset A; Flot JF; Peterlongo P
    Bioinformatics; 2020 Mar; 36(5):1374-1381. PubMed ID: 30785192
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Fec: a fast error correction method based on two-rounds overlapping and caching.
    Zhang J; Nie F; Huang N; Ni P; Luo F; Wang J
    Bioinformatics; 2022 Sep; 38(19):4629-4632. PubMed ID: 35977383
    [TBL] [Abstract][Full Text] [Related]  

  • 35. SAP--a sequence mapping and analyzing program for long sequence reads alignment and accurate variants discovery.
    Sun Z; Tian W
    PLoS One; 2012; 7(8):e42887. PubMed ID: 22880129
    [TBL] [Abstract][Full Text] [Related]  

  • 36. SNP calling by sequencing pooled samples.
    Raineri E; Ferretti L; Esteve-Codina A; Nevado B; Heath S; Pérez-Enciso M
    BMC Bioinformatics; 2012 Sep; 13():239. PubMed ID: 22992255
    [TBL] [Abstract][Full Text] [Related]  

  • 37. VeChat: correcting errors in long reads using variation graphs.
    Luo X; Kang X; Schönhuth A
    Nat Commun; 2022 Nov; 13(1):6657. PubMed ID: 36333324
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Correction of sequencing errors in a mixed set of reads.
    Salmela L
    Bioinformatics; 2010 May; 26(10):1284-90. PubMed ID: 20378555
    [TBL] [Abstract][Full Text] [Related]  

  • 39. smsMap: mapping single molecule sequencing reads by locating the alignment starting positions.
    Wei ZG; Zhang SW; Liu F
    BMC Bioinformatics; 2020 Aug; 21(1):341. PubMed ID: 32753028
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Bi-level error correction for PacBio long reads.
    Liu Y; Lan C; Blumenstein M; Li J
    IEEE/ACM Trans Comput Biol Bioinform; 2017 Dec; ():. PubMed ID: 29990239
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.