BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

144 related articles for article (PubMed ID: 32178828)

  • 1. Using epigenetic data to estimate immune composition in admixed samples.
    Chakravarthy A; De Carvalho DD
    Methods Enzymol; 2020; 636():77-92. PubMed ID: 32178828
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reference-free deconvolution, visualization and interpretation of complex DNA methylation data using DecompPipeline, MeDeCom and FactorViz.
    Scherer M; Nazarov PV; Toth R; Sahay S; Kaoma T; Maurer V; Vedeneev N; Plass C; Lengauer T; Walter J; Lutsik P
    Nat Protoc; 2020 Oct; 15(10):3240-3263. PubMed ID: 32978601
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Cell-Type Deconvolution of Bulk DNA Methylation Data with EpiSCORE.
    Zhu T; Teschendorff AE
    Methods Mol Biol; 2023; 2629():23-42. PubMed ID: 36929072
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An Overview of Current Research in Plant Epigenetic and Epigenomic Phenomena.
    McKeown P; Spillane C
    Methods Mol Biol; 2020; 2093():3-13. PubMed ID: 32088885
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MeDeCom: discovery and quantification of latent components of heterogeneous methylomes.
    Lutsik P; Slawski M; Gasparoni G; Vedeneev N; Hein M; Walter J
    Genome Biol; 2017 Mar; 18(1):55. PubMed ID: 28340624
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Reference-free deconvolution of DNA methylation data and mediation by cell composition effects.
    Houseman EA; Kile ML; Christiani DC; Ince TA; Kelsey KT; Marsit CJ
    BMC Bioinformatics; 2016 Jun; 17():259. PubMed ID: 27358049
    [TBL] [Abstract][Full Text] [Related]  

  • 7. HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data.
    Zhang Z; Wiencke JK; Kelsey KT; Koestler DC; Christensen BC; Salas LA
    J Transl Med; 2022 Nov; 20(1):516. PubMed ID: 36348337
    [TBL] [Abstract][Full Text] [Related]  

  • 8. High-specificity bioinformatics framework for epigenomic profiling of discordant twins reveals specific and shared markers for ACPA and ACPA-positive rheumatoid arthritis.
    Gomez-Cabrero D; Almgren M; Sjöholm LK; Hensvold AH; Ringh MV; Tryggvadottir R; Kere J; Scheynius A; Acevedo N; Reinius L; Taub MA; Montano C; Aryee MJ; Feinberg JI; Feinberg AP; Tegnér J; Klareskog L; Catrina AI; Ekström TJ
    Genome Med; 2016 Nov; 8(1):124. PubMed ID: 27876072
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Cell-type deconvolution in epigenome-wide association studies: a review and recommendations.
    Teschendorff AE; Zheng SC
    Epigenomics; 2017 May; 9(5):757-768. PubMed ID: 28517979
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Epigenetics and Epigenomics of Plants.
    Yadav CB; Pandey G; Muthamilarasan M; Prasad M
    Adv Biochem Eng Biotechnol; 2018; 164():237-261. PubMed ID: 29356846
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Next-generation technologies and data analytical approaches for epigenomics.
    Mensaert K; Denil S; Trooskens G; Van Criekinge W; Thas O; De Meyer T
    Environ Mol Mutagen; 2014 Apr; 55(3):155-70. PubMed ID: 24327356
    [TBL] [Abstract][Full Text] [Related]  

  • 12. [Progresses of methods for epigenomics study].
    Tan JX; Sun YJ
    Yi Chuan; 2009 Jan; 31(1):3-12. PubMed ID: 19138896
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Epigenomics in marine fishes.
    Metzger DC; Schulte PM
    Mar Genomics; 2016 Dec; 30():43-54. PubMed ID: 26833273
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Interindividual methylomic variation across blood, cortex, and cerebellum: implications for epigenetic studies of neurological and neuropsychiatric phenotypes.
    Hannon E; Lunnon K; Schalkwyk L; Mill J
    Epigenetics; 2015; 10(11):1024-32. PubMed ID: 26457534
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DNA Methylation in Whole Blood: Uses and Challenges.
    Houseman EA; Kim S; Kelsey KT; Wiencke JK
    Curr Environ Health Rep; 2015 Jun; 2(2):145-54. PubMed ID: 26231364
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Investigation of epigenetics in kidney cell biology.
    Li LX; Agborbesong E; Zhang L; Li X
    Methods Cell Biol; 2019; 153():255-278. PubMed ID: 31395383
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Epigenomic landscapes and their relationship to variation, fitness, and evolution.
    Battaglia M
    Neurosci Biobehav Rev; 2020 Feb; 109():90-91. PubMed ID: 31911158
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Epigenetic modifications in multiple myeloma: recent advances on the role of DNA and histone methylation.
    Amodio N; D'Aquila P; Passarino G; Tassone P; Bellizzi D
    Expert Opin Ther Targets; 2017 Jan; 21(1):91-101. PubMed ID: 27892767
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integrated Analysis of DNA Methylation, Hydroxymethylation, and Gene Expression Data Using ME-Class2.
    Singh MK; Edwards JR
    Methods Mol Biol; 2021; 2198():467-489. PubMed ID: 32822051
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Epigenetics for anthropologists: An introduction to methods.
    Non AL; Thayer ZM
    Am J Hum Biol; 2015; 27(3):295-303. PubMed ID: 25711975
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.