422 related articles for article (PubMed ID: 32203470)
1. Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia.
Kloetgen A; Thandapani P; Ntziachristos P; Ghebrechristos Y; Nomikou S; Lazaris C; Chen X; Hu H; Bakogianni S; Wang J; Fu Y; Boccalatte F; Zhong H; Paietta E; Trimarchi T; Zhu Y; Van Vlierberghe P; Inghirami GG; Lionnet T; Aifantis I; Tsirigos A
Nat Genet; 2020 Apr; 52(4):388-400. PubMed ID: 32203470
[TBL] [Abstract][Full Text] [Related]
2. Alteration of CTCF-associated chromatin neighborhood inhibits TAL1-driven oncogenic transcription program and leukemogenesis.
Li Y; Liao Z; Luo H; Benyoucef A; Kang Y; Lai Q; Dovat S; Miller B; Chepelev I; Li Y; Zhao K; Brand M; Huang S
Nucleic Acids Res; 2020 Apr; 48(6):3119-3133. PubMed ID: 32086528
[TBL] [Abstract][Full Text] [Related]
3. Acute depletion of CTCF directly affects MYC regulation through loss of enhancer-promoter looping.
Hyle J; Zhang Y; Wright S; Xu B; Shao Y; Easton J; Tian L; Feng R; Xu P; Li C
Nucleic Acids Res; 2019 Jul; 47(13):6699-6713. PubMed ID: 31127282
[TBL] [Abstract][Full Text] [Related]
4. Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia.
Smits WK; Vermeulen C; Hagelaar R; Kimura S; Vroegindeweij EM; Buijs-Gladdines JGCAM; van de Geer E; Verstegen MJAM; Splinter E; van Reijmersdal SV; Buijs A; Galjart N; van Eyndhoven W; van Min M; Kuiper R; Kemmeren P; Mullighan CG; de Laat W; Meijerink JPP
Cell Rep; 2023 Apr; 42(4):112373. PubMed ID: 37060567
[TBL] [Abstract][Full Text] [Related]
5. Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.
Islam Z; Saravanan B; Walavalkar K; Farooq U; Singh AK; Radhakrishnan S; Thakur J; Pandit A; Henikoff S; Notani D
Genome Res; 2023 Jan; 33(1):1-17. PubMed ID: 36650052
[TBL] [Abstract][Full Text] [Related]
6. Multiple CTCF sites cooperate with each other to maintain a TAD for enhancer-promoter interaction in the β-globin locus.
Kang J; Kim YW; Park S; Kang Y; Kim A
FASEB J; 2021 Aug; 35(8):e21768. PubMed ID: 34245617
[TBL] [Abstract][Full Text] [Related]
7. Outward-oriented sites within clustered CTCF boundaries are key for intra-TAD chromatin interactions and gene regulation.
Ge X; Huang H; Han K; Xu W; Wang Z; Wu Q
Nat Commun; 2023 Dec; 14(1):8101. PubMed ID: 38062010
[TBL] [Abstract][Full Text] [Related]
8. 5C analysis of the Epidermal Differentiation Complex locus reveals distinct chromatin interaction networks between gene-rich and gene-poor TADs in skin epithelial cells.
Poterlowicz K; Yarker JL; Malashchuk I; Lajoie BR; Mardaryev AN; Gdula MR; Sharov AA; Kohwi-Shigematsu T; Botchkarev VA; Fessing MY
PLoS Genet; 2017 Sep; 13(9):e1006966. PubMed ID: 28863138
[TBL] [Abstract][Full Text] [Related]
9. Long-range enhancer activity determines Myc sensitivity to Notch inhibitors in T cell leukemia.
Yashiro-Ohtani Y; Wang H; Zang C; Arnett KL; Bailis W; Ho Y; Knoechel B; Lanauze C; Louis L; Forsyth KS; Chen S; Chung Y; Schug J; Blobel GA; Liebhaber SA; Bernstein BE; Blacklow SC; Liu XS; Aster JC; Pear WS
Proc Natl Acad Sci U S A; 2014 Nov; 111(46):E4946-53. PubMed ID: 25369933
[TBL] [Abstract][Full Text] [Related]
10. CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression.
Franke M; De la Calle-Mustienes E; Neto A; Almuedo-Castillo M; Irastorza-Azcarate I; Acemel RD; Tena JJ; Santos-Pereira JM; Gómez-Skarmeta JL
Nat Commun; 2021 Sep; 12(1):5415. PubMed ID: 34518536
[TBL] [Abstract][Full Text] [Related]
11. Chromatin topology and the timing of enhancer function at the
Rodríguez-Carballo E; Lopez-Delisle L; Willemin A; Beccari L; Gitto S; Mascrez B; Duboule D
Proc Natl Acad Sci U S A; 2020 Dec; 117(49):31231-31241. PubMed ID: 33229569
[TBL] [Abstract][Full Text] [Related]
12. 3D chromatin remodeling potentiates transcriptional programs driving cell invasion.
Lebeau B; Jangal M; Zhao T; Wong CK; Wong N; Cañedo EC; Hébert S; Aguilar-Mahecha A; Chabot C; Buchanan M; Catterall R; McCaffrey L; Deblois G; Kleinman C; Park M; Basik M; Witcher M
Proc Natl Acad Sci U S A; 2022 Sep; 119(36):e2203452119. PubMed ID: 36037342
[TBL] [Abstract][Full Text] [Related]
13. Stratification of TAD boundaries reveals preferential insulation of super-enhancers by strong boundaries.
Gong Y; Lazaris C; Sakellaropoulos T; Lozano A; Kambadur P; Ntziachristos P; Aifantis I; Tsirigos A
Nat Commun; 2018 Feb; 9(1):542. PubMed ID: 29416042
[TBL] [Abstract][Full Text] [Related]
14. Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
Khoury A; Achinger-Kawecka J; Bert SA; Smith GC; French HJ; Luu PL; Peters TJ; Du Q; Parry AJ; Valdes-Mora F; Taberlay PC; Stirzaker C; Statham AL; Clark SJ
Nat Commun; 2020 Jan; 11(1):54. PubMed ID: 31911579
[TBL] [Abstract][Full Text] [Related]
15. Many facades of CTCF unified by its coding for three-dimensional genome architecture.
Wu Q; Liu P; Wang L
J Genet Genomics; 2020 Aug; 47(8):407-424. PubMed ID: 33187878
[TBL] [Abstract][Full Text] [Related]
16. Chromatin looping defines expression of TAL1, its flanking genes, and regulation in T-ALL.
Zhou Y; Kurukuti S; Saffrey P; Vukovic M; Michie AM; Strogantsev R; West AG; Vetrie D
Blood; 2013 Dec; 122(26):4199-209. PubMed ID: 24200685
[TBL] [Abstract][Full Text] [Related]
17. The enhancer RNA
Tan SH; Leong WZ; Ngoc PCT; Tan TK; Bertulfo FC; Lim MC; An O; Li Z; Yeoh AEJ; Fullwood MJ; Tenen DG; Sanda T
Blood; 2019 Jul; 134(3):239-251. PubMed ID: 31076442
[TBL] [Abstract][Full Text] [Related]
18. The human β-globin enhancer LCR HS2 plays a role in forming a TAD by activating chromatin structure at neighboring CTCF sites.
Kim J; Kang J; Kim YW; Kim A
FASEB J; 2021 Jun; 35(6):e21669. PubMed ID: 34033138
[TBL] [Abstract][Full Text] [Related]
19. Functional dissection of the Sox9-Kcnj2 locus identifies nonessential and instructive roles of TAD architecture.
Despang A; Schöpflin R; Franke M; Ali S; Jerković I; Paliou C; Chan WL; Timmermann B; Wittler L; Vingron M; Mundlos S; Ibrahim DM
Nat Genet; 2019 Aug; 51(8):1263-1271. PubMed ID: 31358994
[TBL] [Abstract][Full Text] [Related]
20. Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo.
Hanssen LLP; Kassouf MT; Oudelaar AM; Biggs D; Preece C; Downes DJ; Gosden M; Sharpe JA; Sloane-Stanley JA; Hughes JR; Davies B; Higgs DR
Nat Cell Biol; 2017 Aug; 19(8):952-961. PubMed ID: 28737770
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]