422 related articles for article (PubMed ID: 32208422)
21. Software for pre-processing Illumina next-generation sequencing short read sequences.
Chen C; Khaleel SS; Huang H; Wu CH
Source Code Biol Med; 2014; 9():8. PubMed ID: 24955109
[TBL] [Abstract][Full Text] [Related]
22. Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly.
Tan MH; Austin CM; Hammer MP; Lee YP; Croft LJ; Gan HM
Gigascience; 2018 Mar; 7(3):1-6. PubMed ID: 29342277
[TBL] [Abstract][Full Text] [Related]
23. Yes, we can use it: a formal test on the accuracy of low-pass nanopore long-read sequencing for mitophylogenomics and barcoding research using the Caribbean spiny lobster Panulirus argus.
Baeza JA
BMC Genomics; 2020 Dec; 21(1):882. PubMed ID: 33297960
[TBL] [Abstract][Full Text] [Related]
24. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.
Dhar R; Seethy A; Pethusamy K; Singh S; Rohil V; Purkayastha K; Mukherjee I; Goswami S; Singh R; Raj A; Srivastava T; Acharya S; Rajashekhar B; Karmakar S
Gigascience; 2019 May; 8(5):. PubMed ID: 31077316
[TBL] [Abstract][Full Text] [Related]
25. Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American Fundulus killifish.
Johnson LK; Sahasrabudhe R; Gill JA; Roach JL; Froenicke L; Brown CT; Whitehead A
Gigascience; 2020 Jun; 9(6):. PubMed ID: 32556169
[TBL] [Abstract][Full Text] [Related]
26. Two long read-based genome assembly and annotation of polyploidy woody plants, Hibiscus syriacus L. using PacBio and Nanopore platforms.
Koo H; Lee GW; Ko SR; Go S; Kwon SY; Kim YM; Shin AY
Sci Data; 2023 Oct; 10(1):713. PubMed ID: 37853021
[TBL] [Abstract][Full Text] [Related]
27. Systematic Comparison of the Performances of
Wang J; Chen K; Ren Q; Zhang Y; Liu J; Wang G; Liu A; Li Y; Liu G; Luo J; Miao W; Xiong J; Yin H; Guan G
Front Cell Infect Microbiol; 2021; 11():696669. PubMed ID: 34485177
[TBL] [Abstract][Full Text] [Related]
28. Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis.
Linde J; Brangsch H; Hölzer M; Thomas C; Elschner MC; Melzer F; Tomaso H
BMC Genomics; 2023 May; 24(1):258. PubMed ID: 37173617
[TBL] [Abstract][Full Text] [Related]
29. Benchmarking Long-Read Assemblers for Genomic Analyses of Bacterial Pathogens Using Oxford Nanopore Sequencing.
Chen Z; Erickson DL; Meng J
Int J Mol Sci; 2020 Dec; 21(23):. PubMed ID: 33271875
[TBL] [Abstract][Full Text] [Related]
30. Oxford Nanopore MinION Sequencing and Genome Assembly.
Lu H; Giordano F; Ning Z
Genomics Proteomics Bioinformatics; 2016 Oct; 14(5):265-279. PubMed ID: 27646134
[TBL] [Abstract][Full Text] [Related]
31. Evaluation of assembly methods combining long-reads and short-reads to obtain
Shin SC; Choi W; Lee J; Kim HJ; Kim HW
3 Biotech; 2020 Nov; 10(11):480. PubMed ID: 33094089
[TBL] [Abstract][Full Text] [Related]
32. Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools.
Derakhshani H; Bernier SP; Marko VA; Surette MG
BMC Genomics; 2020 Jul; 21(1):519. PubMed ID: 32727443
[TBL] [Abstract][Full Text] [Related]
33. Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction.
Zeng P; Tian Z; Han Y; Zhang W; Zhou T; Peng Y; Hu H; Cai J
Chin Med; 2022 Aug; 17(1):94. PubMed ID: 35945546
[TBL] [Abstract][Full Text] [Related]
34. Nanopore Long Read DNA Sequencing of Protozoan Parasites: Hybrid Genome Assembly of Trypanosoma cruzi.
Díaz-Viraqué F; Greif G; Berná L; Robello C
Methods Mol Biol; 2021; 2369():3-13. PubMed ID: 34313980
[TBL] [Abstract][Full Text] [Related]
35. Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, Trematomus borchgrevinki.
Rayamajhi N; Cheng CC; Catchen JM
G3 (Bethesda); 2022 Nov; 12(11):. PubMed ID: 35904764
[TBL] [Abstract][Full Text] [Related]
36. Characterization, correction and de novo assembly of an Oxford Nanopore genomic dataset from Agrobacterium tumefaciens.
Deschamps S; Mudge J; Cameron C; Ramaraj T; Anand A; Fengler K; Hayes K; Llaca V; Jones TJ; May G
Sci Rep; 2016 Jun; 6():28625. PubMed ID: 27350167
[TBL] [Abstract][Full Text] [Related]
37. Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.
Goodwin S; Gurtowski J; Ethe-Sayers S; Deshpande P; Schatz MC; McCombie WR
Genome Res; 2015 Nov; 25(11):1750-6. PubMed ID: 26447147
[TBL] [Abstract][Full Text] [Related]
38. de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
Istace B; Friedrich A; d'Agata L; Faye S; Payen E; Beluche O; Caradec C; Davidas S; Cruaud C; Liti G; Lemainque A; Engelen S; Wincker P; Schacherer J; Aury JM
Gigascience; 2017 Feb; 6(2):1-13. PubMed ID: 28369459
[TBL] [Abstract][Full Text] [Related]
39. A high-quality de novo genome assembly based on nanopore sequencing of a wild-caught coconut rhinoceros beetle (Oryctes rhinoceros).
Filipović I; Rašić G; Hereward J; Gharuka M; Devine GJ; Furlong MJ; Etebari K
BMC Genomics; 2022 Jun; 23(1):426. PubMed ID: 35672676
[TBL] [Abstract][Full Text] [Related]
40. Improved assembly of noisy long reads by k-mer validation.
Carvalho AB; Dupim EG; Goldstein G
Genome Res; 2016 Dec; 26(12):1710-1720. PubMed ID: 27831497
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
