124 related articles for article (PubMed ID: 32225162)
1. Validating Whole Genome Nanopore Sequencing, using Usutu Virus as an Example.
Oude Munnink BB; Nieuwenhuijse DF; Sikkema RS; Koopmans M
J Vis Exp; 2020 Mar; (157):. PubMed ID: 32225162
[TBL] [Abstract][Full Text] [Related]
2. Towards high quality real-time whole genome sequencing during outbreaks using Usutu virus as example.
Oude Munnink BB; Kik M; de Bruijn ND; Kohl R; van der Linden A; Reusken CBEM; Koopmans M
Infect Genet Evol; 2019 Sep; 73():49-54. PubMed ID: 31014969
[TBL] [Abstract][Full Text] [Related]
3. Towards reliable whole genome sequencing for outbreak preparedness and response.
Nieuwenhuijse DF; van der Linden A; Kohl RHG; Sikkema RS; Koopmans MPG; Oude Munnink BB
BMC Genomics; 2022 Aug; 23(1):569. PubMed ID: 35945497
[TBL] [Abstract][Full Text] [Related]
4. Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Bogaerts B; Van den Bossche A; Verhaegen B; Delbrassinne L; Mattheus W; Nouws S; Godfroid M; Hoffman S; Roosens NHC; De Keersmaecker SCJ; Vanneste K
J Clin Microbiol; 2024 May; 62(5):e0157623. PubMed ID: 38441926
[TBL] [Abstract][Full Text] [Related]
5. Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV).
McNaughton AL; Roberts HE; Bonsall D; de Cesare M; Mokaya J; Lumley SF; Golubchik T; Piazza P; Martin JB; de Lara C; Brown A; Ansari MA; Bowden R; Barnes E; Matthews PC
Sci Rep; 2019 May; 9(1):7081. PubMed ID: 31068626
[TBL] [Abstract][Full Text] [Related]
6. Whole-Genome Sequencing of Human Enteroviruses from Clinical Samples by Nanopore Direct RNA Sequencing.
Grädel C; Terrazos Miani MA; Baumann C; Barbani MT; Neuenschwander S; Leib SL; Suter-Riniker F; Ramette A
Viruses; 2020 Jul; 12(8):. PubMed ID: 32752120
[TBL] [Abstract][Full Text] [Related]
7. Rapid multiplex MinION nanopore sequencing workflow for Influenza A viruses.
King J; Harder T; Beer M; Pohlmann A
BMC Infect Dis; 2020 Sep; 20(1):648. PubMed ID: 32883215
[TBL] [Abstract][Full Text] [Related]
8. Nanopore adaptive sampling of a metagenomic sample derived from a human monkeypox case.
Hewel C; Schmidt H; Runkel S; Kohnen W; Schweiger-Seemann S; Michel A; Bikar SE; Lieb B; Plachter B; Hankeln T; Linke M; Gerber S
J Med Virol; 2024 May; 96(5):e29610. PubMed ID: 38654702
[TBL] [Abstract][Full Text] [Related]
9. First genomic characterization of a Belgian Enterovirus C104 using sequence-independent Nanopore sequencing.
Wollants E; Maes P; Merino M; Bloemen M; Van Ranst M; Vanmechelen B
Infect Genet Evol; 2020 Jul; 81():104267. PubMed ID: 32114255
[TBL] [Abstract][Full Text] [Related]
10. The Applications of Nanopore Sequencing Technology in Animal and Human Virus Research.
Ji CM; Feng XY; Huang YW; Chen RA
Viruses; 2024 May; 16(5):. PubMed ID: 38793679
[TBL] [Abstract][Full Text] [Related]
11. Approaches to Whole Mitochondrial Genome Sequencing on the Oxford Nanopore MinION.
Zascavage RR; Hall CL; Thorson K; Mahmoud M; Sedlazeck FJ; Planz JV
Curr Protoc Hum Genet; 2019 Dec; 104(1):e94. PubMed ID: 31743587
[TBL] [Abstract][Full Text] [Related]
12. A Nanopore Sequencing Course for Graduate School Curriculum.
Arakawa K
Methods Mol Biol; 2023; 2632():113-127. PubMed ID: 36781725
[TBL] [Abstract][Full Text] [Related]
13. Evaluation of real-time nanopore sequencing for Salmonella serotype prediction.
Xu F; Ge C; Luo H; Li S; Wiedmann M; Deng X; Zhang G; Stevenson A; Baker RC; Tang S
Food Microbiol; 2020 Aug; 89():103452. PubMed ID: 32138998
[TBL] [Abstract][Full Text] [Related]
14. Benchmarking of Nanopore R10.4 and R9.4.1 flow cells in single-cell whole-genome amplification and whole-genome shotgun sequencing.
Ni Y; Liu X; Simeneh ZM; Yang M; Li R
Comput Struct Biotechnol J; 2023; 21():2352-2364. PubMed ID: 37025654
[TBL] [Abstract][Full Text] [Related]
15. Discriminating Clonotypes of Influenza A Virus Genes by Nanopore Sequencing.
Cao Y; Liu H; Yan Y; Liu W; Liu D; Li J
Int J Mol Sci; 2021 Sep; 22(18):. PubMed ID: 34576230
[TBL] [Abstract][Full Text] [Related]
16. Comparison of targeted next-generation sequencing for whole-genome sequencing of Hantaan orthohantavirus in Apodemus agrarius lung tissues.
No JS; Kim WK; Cho S; Lee SH; Kim JA; Lee D; Song DH; Gu SH; Jeong ST; Wiley MR; Palacios G; Song JW
Sci Rep; 2019 Nov; 9(1):16631. PubMed ID: 31719616
[TBL] [Abstract][Full Text] [Related]
17. Full-genome amplification and sequencing of Zika viruses using a targeted amplification approach.
Leguia M; Cruz CD; Felices V; Torre A; Troncos G; Espejo V; Guevara C; Mores C
J Virol Methods; 2017 Oct; 248():77-82. PubMed ID: 28633961
[TBL] [Abstract][Full Text] [Related]
18. Expedited retrieval of high-quality Usutu virus genomes
Holicki CM; Bergmann F; Stoek F; Schulz A; Groschup MH; Ziegler U; Sadeghi B
Front Microbiol; 2022; 13():1044316. PubMed ID: 36439823
[TBL] [Abstract][Full Text] [Related]
19. Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing.
Van den Hoecke S; Verhelst J; Vuylsteke M; Saelens X
BMC Genomics; 2015 Feb; 16(1):79. PubMed ID: 25758772
[TBL] [Abstract][Full Text] [Related]
20. Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses.
Wüthrich D; Lang D; Müller NF; Neher RA; Stadler T; Egli A
J Virol Methods; 2019 Apr; 266():30-33. PubMed ID: 30677464
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]