345 related articles for article (PubMed ID: 32236524)
1. Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C.
Field MA; Rosen BD; Dudchenko O; Chan EKF; Minoche AE; Edwards RJ; Barton K; Lyons RJ; Tuipulotu DE; Hayes VM; D Omer A; Colaric Z; Keilwagen J; Skvortsova K; Bogdanovic O; Smith MA; Aiden EL; Smith TPL; Zammit RA; Ballard JWO
Gigascience; 2020 Apr; 9(4):. PubMed ID: 32236524
[TBL] [Abstract][Full Text] [Related]
2. Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome.
Edwards RJ; Field MA; Ferguson JM; Dudchenko O; Keilwagen J; Rosen BD; Johnson GS; Rice ES; Hillier D; Hammond JM; Towarnicki SG; Omer A; Khan R; Skvortsova K; Bogdanovic O; Zammit RA; Aiden EL; Warren WC; Ballard JWO
BMC Genomics; 2021 Mar; 22(1):188. PubMed ID: 33726677
[TBL] [Abstract][Full Text] [Related]
3. De novo assembly of a chromosome-level reference genome of red-spotted grouper (Epinephelus akaara) using nanopore sequencing and Hi-C.
Ge H; Lin K; Shen M; Wu S; Wang Y; Zhang Z; Wang Z; Zhang Y; Huang Z; Zhou C; Lin Q; Wu J; Liu L; Hu J; Huang Z; Zheng L
Mol Ecol Resour; 2019 Nov; 19(6):1461-1469. PubMed ID: 31325912
[TBL] [Abstract][Full Text] [Related]
4. Chromosome-level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of nanopore sequencing, Bionano and Hi-C technology.
Sun L; Gao T; Wang F; Qin Z; Yan L; Tao W; Li M; Jin C; Ma L; Kocher TD; Wang D
Mol Ecol Resour; 2020 Sep; 20(5):1361-1371. PubMed ID: 32419357
[TBL] [Abstract][Full Text] [Related]
5. Genome sequence of the barred knifejaw Oplegnathus fasciatus (Temminck & Schlegel, 1844): the first chromosome-level draft genome in the family Oplegnathidae.
Xiao Y; Xiao Z; Ma D; Liu J; Li J
Gigascience; 2019 Mar; 8(3):. PubMed ID: 30715332
[TBL] [Abstract][Full Text] [Related]
6. Chromosomal-level assembly of the blood clam, Scapharca (Anadara) broughtonii, using long sequence reads and Hi-C.
Bai CM; Xin LS; Rosani U; Wu B; Wang QC; Duan XK; Liu ZH; Wang CM
Gigascience; 2019 Jul; 8(7):. PubMed ID: 31289832
[TBL] [Abstract][Full Text] [Related]
7. The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology.
Ballard JWO; Field MA; Edwards RJ; Wilson LAB; Koungoulos LG; Rosen BD; Chernoff B; Dudchenko O; Omer A; Keilwagen J; Skvortsova K; Bogdanovic O; Chan E; Zammit R; Hayes V; Aiden EL
Gigascience; 2023 Mar; 12():. PubMed ID: 36994871
[TBL] [Abstract][Full Text] [Related]
8. Chromosome-level de novo genome assembly of Telopea speciosissima (New South Wales waratah) using long-reads, linked-reads and Hi-C.
Chen SH; Rossetto M; van der Merwe M; Lu-Irving P; Yap JS; Sauquet H; Bourke G; Amos TG; Bragg JG; Edwards RJ
Mol Ecol Resour; 2022 Jul; 22(5):1836-1854. PubMed ID: 35016262
[TBL] [Abstract][Full Text] [Related]
9. Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly.
Tan MH; Austin CM; Hammer MP; Lee YP; Croft LJ; Gan HM
Gigascience; 2018 Mar; 7(3):1-6. PubMed ID: 29342277
[TBL] [Abstract][Full Text] [Related]
10. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.
Dhar R; Seethy A; Pethusamy K; Singh S; Rohil V; Purkayastha K; Mukherjee I; Goswami S; Singh R; Raj A; Srivastava T; Acharya S; Rajashekhar B; Karmakar S
Gigascience; 2019 May; 8(5):. PubMed ID: 31077316
[TBL] [Abstract][Full Text] [Related]
11. Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome.
Li Y; Gao G; Lin Y; Hu S; Luo Y; Wang G; Jin L; Wang Q; Wang J; Tang Q; Li M
Gigascience; 2020 Oct; 9(10):. PubMed ID: 33099628
[TBL] [Abstract][Full Text] [Related]
12. Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary.
Elbers JP; Rogers MF; Perelman PL; Proskuryakova AA; Serdyukova NA; Johnson WE; Horin P; Corander J; Murphy D; Burger PA
Mol Ecol Resour; 2019 Jul; 19(4):1015-1026. PubMed ID: 30972949
[TBL] [Abstract][Full Text] [Related]
13. Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information.
Kim HS; Jeon S; Kim C; Kim YK; Cho YS; Kim J; Blazyte A; Manica A; Lee S; Bhak J
Gigascience; 2019 Dec; 8(12):. PubMed ID: 31794015
[TBL] [Abstract][Full Text] [Related]
14. Improved chromosomal-level genome assembly and re-annotation of leopard coral grouper.
Han W; Wu S; Ding H; Wang M; Wang M; Bao Z; Wang B; Hu J
Sci Data; 2023 Mar; 10(1):156. PubMed ID: 36949049
[TBL] [Abstract][Full Text] [Related]
15. The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics.
Gopalakrishnan S; Samaniego Castruita JA; Sinding MS; Kuderna LFK; Räikkönen J; Petersen B; Sicheritz-Ponten T; Larson G; Orlando L; Marques-Bonet T; Hansen AJ; Dalén L; Gilbert MTP
BMC Genomics; 2017 Jun; 18(1):495. PubMed ID: 28662691
[TBL] [Abstract][Full Text] [Related]
16. An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome.
Davenport KM; Bickhart DM; Worley K; Murali SC; Salavati M; Clark EL; Cockett NE; Heaton MP; Smith TPL; Murdoch BM; Rosen BD
Gigascience; 2022 Feb; 11():. PubMed ID: 35134925
[TBL] [Abstract][Full Text] [Related]
17. A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds.
Wallberg A; Bunikis I; Pettersson OV; Mosbech MB; Childers AK; Evans JD; Mikheyev AS; Robertson HM; Robinson GE; Webster MT
BMC Genomics; 2019 Apr; 20(1):275. PubMed ID: 30961563
[TBL] [Abstract][Full Text] [Related]
18. Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome.
Jagannathan V; Hitte C; Kidd JM; Masterson P; Murphy TD; Emery S; Davis B; Buckley RM; Liu YH; Zhang XQ; Leeb T; Zhang YP; Ostrander EA; Wang GD
Genes (Basel); 2021 May; 12(6):. PubMed ID: 34070911
[TBL] [Abstract][Full Text] [Related]
19. Chromosome-level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818).
Ran Z; Li Z; Yan X; Liao K; Kong F; Zhang L; Cao J; Zhou C; Zhu P; He S; Huang W; Xu J
Mol Ecol Resour; 2019 Nov; 19(6):1647-1658. PubMed ID: 31483923
[TBL] [Abstract][Full Text] [Related]
20. Construction of a chromosome-scale long-read reference genome assembly for potato.
Pham GM; Hamilton JP; Wood JC; Burke JT; Zhao H; Vaillancourt B; Ou S; Jiang J; Buell CR
Gigascience; 2020 Sep; 9(9):. PubMed ID: 32964225
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
